Gene Dred_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3319 
Symbol 
ID4956019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3599098 
End bp3599796 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content40% 
IMG OID640182510 
Producthypothetical protein 
Protein accessionYP_001114644 
Protein GI134301148 
COG category[R] General function prediction only 
COG ID[COG1811] Uncharacterized membrane protein, possible Na+ channel or pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGAA CAATTGTAAA TGCTGCGGCA ATAATTGCCG GAACAGCCCT AGGTTTAATG 
TTTCGAAAAG GAATCAGTGA ATCCATAAAC AATACAGTCA TGAGTGGTAT AGGTTTGGCA
GTAGCATTAA TTGGTTTTAA AATGGCTTTA AAAACCGAGA ATGAGTTAAT TGTTATATTA
AGTTTAGTGT TAGGCGGTAT CATGGGAGAA TTATTAAATA TTGAAGGATG GTTAGCCAGA
ACCGGTACAT ATTTAGAGTC TAGGGTTGGC GGTAACGGTC AGGGTGAAGT GGCAAAGGCC
TTTGTAACCA CCAGTTTGAT TTATTGTGTT GGGGCAATGG GAATTATGGG TGCATTGGAA
GATGGAATTA CCGGCAATGC CACAACACTA TATGCTAAAT CACTCTTGGA TGGTACAACT
GCTGTTGTGT TTACCACGAC AATGGGGTTT GGTGTAGTAT TTTCTGCTAT ACCCGTATTT
ATTTATCAAG GGGCCATAAC CTTGGCTGCC AGTGGTATCA AGGAGTTTCT TACTCCTTCT
ATGATTAACG AAATGACGGC CACAGGAGGG TTGTTGATTG TTGGTATTGC AAGTAACATA
TTGGGTATTA AACCGGTAAA GGTTGGTAAT TTATTACCGG CCATTCTGAT GGCATTATTT
TTTACCTGGT TGTGGGCAAA CCTTAATATT GGTCTATAG
 
Protein sequence
MTGTIVNAAA IIAGTALGLM FRKGISESIN NTVMSGIGLA VALIGFKMAL KTENELIVIL 
SLVLGGIMGE LLNIEGWLAR TGTYLESRVG GNGQGEVAKA FVTTSLIYCV GAMGIMGALE
DGITGNATTL YAKSLLDGTT AVVFTTTMGF GVVFSAIPVF IYQGAITLAA SGIKEFLTPS
MINEMTATGG LLIVGIASNI LGIKPVKVGN LLPAILMALF FTWLWANLNI GL