Gene Dred_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3318 
Symbol 
ID4956023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3598099 
End bp3598947 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content36% 
IMG OID640182509 
ProductdegV family protein 
Protein accessionYP_001114643 
Protein GI134301147 
COG category[S] Function unknown 
COG ID[COG1307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00762] EDD domain protein, DegV family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGA AAGTTGCTGT GGTTACAGAC AGTACCTGTG ATTTAGATAA AGAGTTAATA 
CATAAATATA ATATTCATGT TTTGCCTTTG AATGTAATTT ATTCTGATGA AGAGGAATAT
CTAGATAGAG TTGATATAAG CCCCAAGGAG ATTTATGATC GAATGCCAGG GGAAGTACCT
TCAACATCTT TGCCCTCACC TGCTAATATT ATTAACTTAT TTAAAAAGCT TGAAAAAGAA
GGGTTTACAC ATGTTATTTC CATACACATC TCCAGTGGAT TAAGTGGTAC CTATAATGCT
GTAAGGACCA TAGCGCGGGA TTTTAAAAAC ATGGTAATTG AAGTAATTGA CTCAAAGGCA
TTATCCTTGG GGTTAGGAAT TCCCGTGCTA GAAGCAGCGA AATCAATCAA GGAAACTATG
AATTTTGATG TTGCTGTGAA GAAAGCTAAA GATATTATGA GTAAAACAGA AATATACTTC
GTGGTAGGGA CCTTGGATTA TTTAAGAAAG GGCGGGCGTA TTGGTTATGT TGCAGGTACC
ATTGGAGAGA TCATGCAAAT AAAACCAATT ATATCTATTA ACGAAGAAGG TAAATATTAT
ACCTTTGATA AGGTTAGGGG AAGAAAAAAA TCTTTACATA AGCTTTTTGA AATAACCAGT
AAAAAAATTG AGAGTAAAAA AGTAACAGTG GCAGTCATGC ATGGTGGAGC TGGTGATGAA
GCCAAAGAAT TACTGGATAA AATCAAACAG TTACCCAATG TAGAGAATAC TTATACCGGT
CAGGTGGGCC CAGTTATTGG TGTTCATGCA GGCCCGGGAT TAATTGGCGT ATGCATCATA
GAAGTATAA
 
Protein sequence
MNEKVAVVTD STCDLDKELI HKYNIHVLPL NVIYSDEEEY LDRVDISPKE IYDRMPGEVP 
STSLPSPANI INLFKKLEKE GFTHVISIHI SSGLSGTYNA VRTIARDFKN MVIEVIDSKA
LSLGLGIPVL EAAKSIKETM NFDVAVKKAK DIMSKTEIYF VVGTLDYLRK GGRIGYVAGT
IGEIMQIKPI ISINEEGKYY TFDKVRGRKK SLHKLFEITS KKIESKKVTV AVMHGGAGDE
AKELLDKIKQ LPNVENTYTG QVGPVIGVHA GPGLIGVCII EV