Gene Dred_3307 details

Gene Information

• Locus tag: Dred_3307
• ID: 4956032
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: -
• Start bp: 3589204
• End bp: 3589626
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640182498
• Product: single-strand binding protein
• Protein accession: YP_001114632
• Protein GI: 134301136
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000227913
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAATA AGATCATATT AATTGGGCGT CTGACCCGGG ATCCAGAACT ACGATATACC 
ACAAATGGCG TTGCTGTGGC AAGACTGACA ATAGCGGTTG ATCGCCCGCA ATTTAATAGA 
GAAAGAGAAA AGGAAACGGA TTTTATTGAC ATTGTTGTAT GGCAAAAGCT GGCTGAAACC 
TGTGCTAATA ACCTAGGCAA GGGTCGCTTA ATTGCTGTGG ATGGTCGTTT ACAAATCCGC 
TCCTATGATG ACAGCCAGGG TATAAGACGT AAAGCTGCAG AAGTTGTGGC AGACTCTATC 
CGCTTCCTGG ATTGGCCCAA AGACAGGGAC AACCAGGGTG GTGGCCAGTT TAACAGTGGT 
AGCGGTAGCG GCAGTGGTTT TGGAAGCGAA ATTAGCTTTA ACGGAGATGA CATACCGTTC 
TAG 

 

Protein sequence

MLNKIILIGR LTRDPELRYT TNGVAVARLT IAVDRPQFNR EREKETDFID IVVWQKLAET 
CANNLGKGRL IAVDGRLQIR SYDDSQGIRR KAAEVVADSI RFLDWPKDRD NQGGGQFNSG 
SGSGSGFGSE ISFNGDDIPF