Gene Dred_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3279 
Symbol 
ID4957710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3558412 
End bp3559548 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content43% 
IMG OID640182465 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001114604 
Protein GI134301108 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACAT TTGTCATTAA ACCCAAGATT TATTTTAATG AGGGATCCAT GGAATTTCTC 
AAAGAAATCA AAGGCTCCTG TGCGTTTATT GTTTCTGATT CTATTATGGA GAAGTTAGGC
TACCTCCAAA AAACTATAGA TTATCTCAAT GAAACAGGGA TAAAGTCTAC TATTTTTACG
GAAGTACGCC CTGACCCAGA TGTAAAAGTC ATTGCCGCAG GTATGAAGAG ATACCTGGAA
ACCCAAGCAG ATACCATCGT TGCTTTGGGT GGGGGCTCTG TCATTGATGC TGCCAAGGGC
ATTATATATT CCTTGTGGCA GTTCAGAAAA GCCGCCGGGG AGGAATTCAA GAAACCACTA
TTTATTGCCA TTCCTTCCAC AAGTGGTACT GGATCTGAAG TGACTAATTT CTCCGTCATT
ACTGCGGAAG GTGAAAAGGT GTGCATTGTA GATGAGTGGA TGGCTCCGGA TATAGCCATA
CTTGATTCCA CTTGTATCCA GCATGTTCCC CAGCCTGTGG TGGCAGATAC TGGTATAGAT
GCTTTGGTAC ATGCCATCGA GGCCTATGTT TCTACGGAGG CAACCATTTG TACAGATGCC
CTTGCGGAGA AGGCAGTCCA ATTAATTTTT GAGAATCTCA AGACTTTATA CAACGACACG
AACAATTCCT GTGCCAGAGA ACGTATTCAA AAGGCATCTT GCTTAGCGGG TATGGCTTTT
ACAAATGCGA GTCTGGGGAT CAACCACAGC TTAGCCCATG CTTTGGGAGC AACTTTTCAT
ATTTCCCACG GACGGTCCAA TGCGCTCCTA CTGAGCGCAG TCATTGAATA TAATGCTAAT
TTGAACAGCA ATGACAGTAG ATATGTAGCT GAAAAATACG CAAAATTGGC CGCTGCGATG
CAACTGCCTG CTCGGACGTA TCGGGAAGGA ACGATAAATT TCATGCAGGC CGTCAAGGAT
TTGAAAAAAT CCCTGGGCAT TCCCAAGGGC ATTCGAGAGT TGGGAATTGA TAAAAGTAAA
TTTGAGAATG AACTGGACAA AATGGTTGAT CTAGCCCTCC ATGATCGGTG TACCCCCACC
AATCCTAGAA AACCGTCCAG AGAAGATCTG ATCGGTATCT ATCAAAAATC ATTTTAA
 
Protein sequence
MKTFVIKPKI YFNEGSMEFL KEIKGSCAFI VSDSIMEKLG YLQKTIDYLN ETGIKSTIFT 
EVRPDPDVKV IAAGMKRYLE TQADTIVALG GGSVIDAAKG IIYSLWQFRK AAGEEFKKPL
FIAIPSTSGT GSEVTNFSVI TAEGEKVCIV DEWMAPDIAI LDSTCIQHVP QPVVADTGID
ALVHAIEAYV STEATICTDA LAEKAVQLIF ENLKTLYNDT NNSCARERIQ KASCLAGMAF
TNASLGINHS LAHALGATFH ISHGRSNALL LSAVIEYNAN LNSNDSRYVA EKYAKLAAAM
QLPARTYREG TINFMQAVKD LKKSLGIPKG IRELGIDKSK FENELDKMVD LALHDRCTPT
NPRKPSREDL IGIYQKSF