Gene Dred_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3263 
Symbol 
ID4957611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3544286 
End bp3545479 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content35% 
IMG OID640182449 
Producthistidine kinase internal region 
Protein accessionYP_001114588 
Protein GI134301092 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA CTAACAAAAC ATTAAAAAAT TTAGTTAATT CCAATCTATA CTCTCGATAT 
AGCGGATTCT TATCCCTATC CAATATTTCC TTACAACTGA TCGATACCAA TGGCGATATT
CTGCTTGAGT TTAACCCGTC TCCCGATTTT TGTAAACTTG TTTGCCAAGA AGATGATAAG
CGTATATGCT CGGACTATAT TTCTAGATTA AAATCAGGTA AAGGAGACCG ATTCACCTGT
CGGTACGGAC TTACAAACAT TCTTTTGCCA GTGGATGTTA ACAAGCAAAC TATTGGGTAT
GTCGTCGGAG CGCAGGTTTA TTCACCGGAT AGTGAATATC AGAAATATCT GATTGACATA
ATGGCAATAG CAAAGGATAA AAAACTGGAA CCGGAATTTA TTGCTAAATC AATTGCAGCG
ATAAAAACAA TAGAAGCAAA CAAAGTTGAT ATTCATGAAC AACTTTGTAA CCATATTGCC
AAAAATATCT CCTATGACTT TTCTGAAAGC ATCAATAATA CCGATAAGGC CATAGCAAGA
TTGTCAATAG AAAAAGAAAT GCTGGAAAAA AAGATTCTTG ACTTAGAAGC TAAAAATATG
TCTTTGGTAG TTAACCCCCA TTTCCTGTTT AATACCTTGA ACTCCATAGC ACGCATTGCC
TATTTTGAAA AATCCCATAC AACGGAAGAA CTCATTTACT GTCTTTCCGA TTTATTGCGA
TATAACTTAA AGCAAGACGA CGAGTTGCAC ACTATCGGAA ACGAGATGGA TAATATAGAG
AAATACCTTT ATATTCAGAA AGTTAGATTT AAAAATCGTC TGGAATATGA CATAAATATT
GCAGATGATA TTAAGCACCA TAGAATACCC AATATGATTA TACAACCTAT TGTTGAGAAT
GCTCTTATCC ATGGCATTTC CCCTAAAAGG GACGGAGGCA GGATAAAAAT TTATGCAGAA
AAATATAAAA ATGACATAAA TATTTTTGTT ATGGATAATG GAAATGGTTT TCCCAAAGAA
GTCTTACAAA GTTTGCAACA ACCGGAAAAT AAGCTAGGAA TAGGTTTTCG CAGTACGGAC
AAACGATTGA AACGATATTT TGGAGATTGT TACGGGTTGA AAATCATAAA ATCAGACTAT
AGTGGAAGTA CTGTCACCAT CTCGATTCCC ACCAAACCCA ATGCGAGGCG ATAG
 
Protein sequence
MNKTNKTLKN LVNSNLYSRY SGFLSLSNIS LQLIDTNGDI LLEFNPSPDF CKLVCQEDDK 
RICSDYISRL KSGKGDRFTC RYGLTNILLP VDVNKQTIGY VVGAQVYSPD SEYQKYLIDI
MAIAKDKKLE PEFIAKSIAA IKTIEANKVD IHEQLCNHIA KNISYDFSES INNTDKAIAR
LSIEKEMLEK KILDLEAKNM SLVVNPHFLF NTLNSIARIA YFEKSHTTEE LIYCLSDLLR
YNLKQDDELH TIGNEMDNIE KYLYIQKVRF KNRLEYDINI ADDIKHHRIP NMIIQPIVEN
ALIHGISPKR DGGRIKIYAE KYKNDINIFV MDNGNGFPKE VLQSLQQPEN KLGIGFRSTD
KRLKRYFGDC YGLKIIKSDY SGSTVTISIP TKPNARR