| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3248 |
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| Symbol | |
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| ID | 4957545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3529581 |
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| End bp | 3532835 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640182434 |
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| Product | SNF2 helicase associated domain-containing protein |
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| Protein accession | YP_001114573 |
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| Protein GI | 134301077 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTAT TATCAACCAA ATATATTCAG AAATGGTGCG GCTCCCCTTC TATTTACCAG
CGGGGGGTCT CTTATTTTAG ACAGGGGCGT GTCCTTGAAC TAATTCAGGA TTTCGATGAA
GACAGTTATT ATGCCCAAGT GGTTGGCAGT GAGGAATATC AGGTAGTTAT TCGTTTGACG
GATCATGACA TAGATGCCAC CTGCGACTGC CCAGCTTATG AAACCTATTG GACCTGTAAA
CACATTATTG CAGTTTTGCT GGAAATTGAG CAACTACAAC GAGAAGACAT GGGGAAAGCA
CCCCGGAATA TTGCAGAACC AGAAAAGAAC AAAGGGGCTT CACGCAAATA TTACAAAGCG
GGACAACTGA TTGATTCCTT TGTGAATGGA CTCAACCTGA CGGAAAAGGA TAAGCAGAAC
CACCATAAAC AAGTATTAAC AGTTGAATAT ATTATTAAAG AGTATTTCTA CGGGCTGCCT
TCCCGGAACA AGCTACTCAA GATAGAGTTA AAAGTAGGAG AAAAGCGGCC CTACATTGTC
AAAAACCTTC GCGAATTTTT GCAGTGTATT GAAAAACAAG ATAACTACTA TTTTACGAAA
AAATTTACCT ATCAACCTAC GGAACATACC TTTTTAGAAG AGGACCAAGA AATTATTCGA
ATCCTACAGG AGATTAACAA ACAGGAAGAA TTTTACCACA AGCAACAGAG TTATTATCAT
TCAAAAATAG AGGGGGAGCG GTTGCTAGTT ATTCCGCCAA TGTTGGCGGA GAAGCTTTTT
GCCAAATTAC AAGGTAGAAA TGTTACCTTC GAAGAACAAG CTGGCCTAAT TTTTGAGCCC
TATAGTGAAG AATGTAAACT ACCATTTACT TTTAACTTAG AAAAAGGGTC CAACGGGGAT
TTTCAAATTG ATTTGACTTC ATTGGAGCGG ACCTCTTACT ATGAGTCCTA TGGCTGGCTG
GTCCAGAACA ATGTTGTTTA TAAATTATCC CCCACCCAGC AGTCTTTGTT AGATAATATT
TACCGTTTTT TACAGGAACC CAATGGAAAC ACTTTACAGG TGGCACAAAG CCAAATACAG
CCCTTTATCT CCCATGTGAT ACCTGGATTA AAGAAGCTAG GTAGAGTGGA AATAGCGGCC
CAAGTGTCCA ATCAAATTAT CAGCCCGGAC CTAACCGTAA AGGTATTTGT GGATCGGCAA
GACGAGCGGA TATTGGCAAA AATCGAATAC CATTATGGAG ACATTATCAT TGATCCCTTT
CAATCGGCGG CAACAGAAAA GACAGAAAAA GAAATAATCC TCCTGCGGCA GGTGGAAAAA
GAACAGGAAA TCATGAAAAT CTTTGAAAAT ACTCCTTTAA GGTATAACGG CAAGGAATGT
TACCTGGATG GTGAGGATCA GATTTACGAT TTCTTATATA CCTCTCTGCC AAAACTTCAA
GAACAGGCGG AGTTATATTT AACCAGTGCC GTCAAAGCTC TGATTATGCC CAAACAACAT
GCGTCCATGA CCAAGATTGA TATTAATTCA GAGGGCAATT TATTGGAGAT TAGCTTTGAC
TTGGAGGGAA TTGACCACCA AGAAGTTACA CATATTTTGC AATCTGTGGT GGAAAAGAAA
AAATATTACC GATTGAACAG CGGCGCTTTC GTTTCACTGG AAGATGAAGC CTTTCGAGAG
ATGAATCATT TGTTTGAGGA ATTACACCTC CACAAGGGGC AATTTAAGAG GGACGTATTC
CAGCTCCCTG TTTATCGTGG TTTACAAGTT GAAAGTATCA TGAACGGCGT AAATCAAAGT
TCAATCAAGC TAGGCAAGAA ATTTCGCCGC CTGATCCAAG ATTTGAAGAA TCCCGATGCC
ATTGATTTTG CATTGCCCGC GGATTTAAAT GCAACATTGC GGGAGTATCA ACAAACTGGC
TTTCAGTGGC TGAAAACCAT GGCCCATTAT CAGCTGGGCG GCATCTTGGC CGATGACATG
GGGCTGGGCA AGACCCTGCA AGCCATTGCC TATCTTCTTT CCGAAAAAAA TCAAGATGAA
AAGAAGAGAA GGACTTCACT GGTTGTTTCT CCGGCTTCCC TGGTTTACAA CTGGAAAAGT
GAGTTTGAAA AATTTGCACC CCACTTAGAT GTTGTGGTGG TTTACGGCCC GCCGGAGGAG
CGGGACAGAC TACTGCGTGA ATGTAAACCA GATGTCTTCG TCACCTCTTA CCCGCTACTG
CGACAGGACC AGGATGTATA CGCAGAGAAA GAATTTGACT CCCTTATTTT AGATGAAGCC
CAGTCCATTA AGAACCATTT GACTAAAACA GCCAAAGCAG TGAAACGGCT CCAGGCAGCC
AAACGATTTG CCTTGAGTGG AACACCGATT GAAAATTCCC TAGACGAACT TTGGTCTCTC
TTTGACGCCA TACAGCCTGG TTTTTTTCAA AGTCAACGTG CCTTTAGCAA ACTTACCCGG
GACCGCATTG CCCGGATGGT ACGCCCCTTT ATATTAAGGC GGGTAAAACA AGATGTATTG
AGAGAGCTGC CGGAAAAAAT TGAAACCGTT CATCAATCGG AATTAACCAA AGGACAGAAG
GAACTGTATC TAGCTTATTT AGAAAAAATA AGACAAGAAA CTAAAGATGC CTTACAAATA
GAAGGATTTG AAAAAAGCCG TATTAAGATT TTAGCAGGAT TAACACGCCT AAGACAATTA
TGTTGTCATC CTTCGCTCTT CCTGGAAAAC TATAGCGGCC AATCAGGCAA ACTAGAGCAG
CTTATGGAAA TAATTGAAAA CACCTTAGAA AACAAACGAA GGCTCCTAGT ATTCTCTCAA
TTTGCCAGCA TGCTTGGTAT TATTTGTGAA GAACTAGACC GGCTGAACAA GAGCTATTTT
TACCTTGATG GACAGACCCC TGCCAAGGAT CGTGTAGAAA TGACGCAACG TTTTAATAAT
GGGGAGAAGG ATCTTTTTCT TATCTCTTTA AAAGCCGGCG GAACCGGACT GAATTTAACA
GGTGCCGATA CAGTCATTTT ATATGATCTG TGGTGGAATC CTGCCATTGA AGAGCAGGCA
GCTGGACGAG CCCACCGCAT GGGACAAAAG AATTGTGTTC AGGTGATAAA GCTTATTACT
AAAGGAACCA TTGAGGAAAA AATATATGAG ATGCAGCAAC AGAAAAAAGA ACTAATTGAA
CAAGTTATCC GGCCCGGGGA AACGGCAATG GCTAGCCTCT CCGAGGATGA TCTTAAAGAA
ATTTTGGGTA TATAA
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| Protein sequence | MILLSTKYIQ KWCGSPSIYQ RGVSYFRQGR VLELIQDFDE DSYYAQVVGS EEYQVVIRLT
DHDIDATCDC PAYETYWTCK HIIAVLLEIE QLQREDMGKA PRNIAEPEKN KGASRKYYKA
GQLIDSFVNG LNLTEKDKQN HHKQVLTVEY IIKEYFYGLP SRNKLLKIEL KVGEKRPYIV
KNLREFLQCI EKQDNYYFTK KFTYQPTEHT FLEEDQEIIR ILQEINKQEE FYHKQQSYYH
SKIEGERLLV IPPMLAEKLF AKLQGRNVTF EEQAGLIFEP YSEECKLPFT FNLEKGSNGD
FQIDLTSLER TSYYESYGWL VQNNVVYKLS PTQQSLLDNI YRFLQEPNGN TLQVAQSQIQ
PFISHVIPGL KKLGRVEIAA QVSNQIISPD LTVKVFVDRQ DERILAKIEY HYGDIIIDPF
QSAATEKTEK EIILLRQVEK EQEIMKIFEN TPLRYNGKEC YLDGEDQIYD FLYTSLPKLQ
EQAELYLTSA VKALIMPKQH ASMTKIDINS EGNLLEISFD LEGIDHQEVT HILQSVVEKK
KYYRLNSGAF VSLEDEAFRE MNHLFEELHL HKGQFKRDVF QLPVYRGLQV ESIMNGVNQS
SIKLGKKFRR LIQDLKNPDA IDFALPADLN ATLREYQQTG FQWLKTMAHY QLGGILADDM
GLGKTLQAIA YLLSEKNQDE KKRRTSLVVS PASLVYNWKS EFEKFAPHLD VVVVYGPPEE
RDRLLRECKP DVFVTSYPLL RQDQDVYAEK EFDSLILDEA QSIKNHLTKT AKAVKRLQAA
KRFALSGTPI ENSLDELWSL FDAIQPGFFQ SQRAFSKLTR DRIARMVRPF ILRRVKQDVL
RELPEKIETV HQSELTKGQK ELYLAYLEKI RQETKDALQI EGFEKSRIKI LAGLTRLRQL
CCHPSLFLEN YSGQSGKLEQ LMEIIENTLE NKRRLLVFSQ FASMLGIICE ELDRLNKSYF
YLDGQTPAKD RVEMTQRFNN GEKDLFLISL KAGGTGLNLT GADTVILYDL WWNPAIEEQA
AGRAHRMGQK NCVQVIKLIT KGTIEEKIYE MQQQKKELIE QVIRPGETAM ASLSEDDLKE
ILGI
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