| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3235 |
|---|
| Symbol | |
|---|
| ID | 4957477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3517314 |
|---|
| End bp | 3518018 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640182423 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001114562 |
|---|
| Protein GI | 134301066 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR03664] futalosine nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTAA AATTGGTAGA AAAAGTAGCA ACCCCCCATG GGTTAATGCC CGGCAGAGCT
GAAATGCGTG TTCTGGTAAT GACTGCTGTC TCGGCCGAGA GGGATGCGAT ATTACGTGGT
CTAAACAATG ATACAAGGTT TGATGTCAGG ATAGCCGGAG TCGGTCCGGT AGCCGCTGCT
GTCAGTACAA CGAAGGTGTT GGCAACCGCC CAGTATGACT TGGTTGTAAG TGCCGGTATT
GGTGGAGGCT TTACTGGTAA AGCTGGAGTA GGCTCCTTGG TGGTGGCCAA CCAGATTGTT
GCCGCCGACT TAGGGGCAGA AAACCCGGCG GGTTTCTGTA GTTTGGATCA GTTGGGCTTC
GGTTCCACTT ACATCCAAAT CGATGCAGGG CTGGTGAAGC AGGTTTACGA GGCACTGCTG
TTGGCTAATT TGCCAGTCAA TACTGGTGCG GTGCTCACCG TATCAACTGT CACGGGTACC
GCTGCCAGTG CACAATCAAG GGCTGCCCGG GTGCCTGGGG CCACTGCCGA GGCCATGGAG
GGATATGGCG TGGCCCTGGC AGCCCTTGAT TGTGGTATAC CCGTTTTGGA GATTCGTGCT
ATTTCAAACC TAGTGGGTCC CCGGGACCGG TCTGCCTGGC GAATCAAAGA GGCCCTAGAT
GTCCTAGAAG CGGCTAGTTT GGTATTATCG GAGGTACTGC GATGA
|
|---|
| Protein sequence | MELKLVEKVA TPHGLMPGRA EMRVLVMTAV SAERDAILRG LNNDTRFDVR IAGVGPVAAA
VSTTKVLATA QYDLVVSAGI GGGFTGKAGV GSLVVANQIV AADLGAENPA GFCSLDQLGF
GSTYIQIDAG LVKQVYEALL LANLPVNTGA VLTVSTVTGT AASAQSRAAR VPGATAEAME
GYGVALAALD CGIPVLEIRA ISNLVGPRDR SAWRIKEALD VLEAASLVLS EVLR
|
|---|
| |