Gene Dred_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3234 
Symbol 
ID4957476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3516469 
End bp3517317 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content51% 
IMG OID640182422 
Producthypothetical protein 
Protein accessionYP_001114561 
Protein GI134301065 
COG category[R] General function prediction only 
COG ID[COG2107] Predicted periplasmic solute-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CCTTTTCACC TTGTCCTAAT GATACATTTA TTTTTCATGC CTGGGTACAC 
GGATTAATAC CCGGTGCCCC CAAGCTGGAT GTAACCTATG CTGATATTGA TATTACCAAC
AGTTTGGCAG CCAGTAGCAA CGGGCCCGAG GTAATTAAAA TATCCTACGC AGCTTTGCCC
TGGGTATTGT CGGAATACGC GTTATTGCCC TGTGGAGGTG CGTTGGGTAA AGGCTGCGGT
CCACTGCTAC TGACTTCAAA CAAAGTAGGC AGCATCAAAG ATCCAACGTT GATTGCAGGA
AAGCGGGTGG CGGTACCCAG TGAACGATCA ACAGCTTATT TACTCTTTCG GTTATGGATA
GCCCAACATG TGCCAGGGGG CGTGGGTGAG ATAGTAGTTC TGCCCTTCCA TCAGATCATG
CCGGCGGTAC GAGACGGGTT GGTTGATGCT GGGCTGGTGA TCCATGAGGC ACGCTTTACC
TATCCTTCAT TTGGGCTGAC TCTCTTGGTC GACTTAGGCA ATTGGTGGGA GGCAGACACC
AACCTGCCCA TCCCGCTGGG TGCAATTATT GCCCGTCGCT CACAGGATCT ATCAGCCATT
GCTGGTTGGA TTCGTGCATC GGTTAAACAT GCCTGGACCC AGCCGGAGGT GTCACAACAG
TACGTGCTAG AACATGCCCA AGAGTTGTCC CCCGAAGTTG CGCAGGCGCA TATTAAGCTT
TACGTAAATG AATTCACCGA GCATATAGGT GAGATGGGGT ATCAGGCCGT AGAAGCCTTG
CTTAGCCGAG CCGCCCAAGA AGGATTGGTT CCAAAGGTAG ACTGGGCAGC CCTAGGTTAT
CAATCATAG
 
Protein sequence
MKIAFSPCPN DTFIFHAWVH GLIPGAPKLD VTYADIDITN SLAASSNGPE VIKISYAALP 
WVLSEYALLP CGGALGKGCG PLLLTSNKVG SIKDPTLIAG KRVAVPSERS TAYLLFRLWI
AQHVPGGVGE IVVLPFHQIM PAVRDGLVDA GLVIHEARFT YPSFGLTLLV DLGNWWEADT
NLPIPLGAII ARRSQDLSAI AGWIRASVKH AWTQPEVSQQ YVLEHAQELS PEVAQAHIKL
YVNEFTEHIG EMGYQAVEAL LSRAAQEGLV PKVDWAALGY QS