| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3225 |
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| Symbol | |
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| ID | 4957446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3507111 |
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| End bp | 3508514 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640182413 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001114552 |
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| Protein GI | 134301056 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACC ATAGCAATGA AAATAAACCC TTGCAAAGGG GTTTGAAAAA TCGGCATATT
CAAATGATTG CCCTTGGAGG TGGCATTGGT TCTGGTTTGT TTTATGGTTC TGCACCTGCC
ATAAAGTTAG CCGGGCCGGC CTTAACACTG GGCTACCTCC TAGGGGGGTT AATCGCCTTT
GCCATTGTAC GGGCCTTGGG GGAATTGGCG GTGGAGGAGC CGGTTTCTGG TTCCTTTAGT
TACTATGCCA ACAAATACAT TAGCTCCTTT GCTGGTTATT TAACTGGCTG GACCTATTGG
TTTTTGTGGA TTGTGATTGG TATGGTGGAA ATCACGGTGG TTGGTGTTTA TGTGAATTTC
TGGTTCCCGG ATATTCCACA ATGGCTTTCC GCCCTCGGTG TGTTAGCGCT GATCACCGGT
GTTAATCTGA CCACTGTGAA ATCCTACGGC GAATTTGAAT TTTGGTTCTC CCTAATTAAG
GTTGTTACAG TTGTTGGCAT GATCGTCATT GGTGTTTTTA TGATCATCTT TGGCCTAGGT
GTCGGGCAAC CCTTGGGCTT TGATAATTTT ATTGTAAATG GTGGATTTAT GCCCAATGGT
ATCCAGGGCT TACTGATGGC ATTGGTGTTG GTTATGTTTT CTTTGGGTGG GGTGGAATTA
ATAGGTGTCA CTGCCGGTGA AGCAGACAAT CCTGATAAAA CCATTCCCAA AGCCATTAAT
AATGTTATTT GGAGAATATT AATTTTTTAT GTACTGGCCA TAGCCATCAT GTTGCTGCTT
TGTCCCTGGA ATGAAATCGG TACTCAGGGC AGTCCCTTTG TTATTGTTTT TGATAAAATG
GGGATACCGG CTGCTGCTGG AATTATTAAC TTCGTTGTGT TAACTGCAGC CCTTTCGGCA
TTTAATAGTT GCTTGTTCAG TACGGGCAGA ATGTTATATA ACTTAGCCAG TCAAAACCAT
GCACCAAAAA TCTTTGGCCG ATTAAGTAAG TCCAGTACTC CCAGTATAGG AATATTGTTT
TCTGCCTTTT TCCTGTTAAT TGCAGTGGTT TTAAATTACT TTATGCCGGA AAAGGTATTT
ATGTATATCT CCTCCATCGC CACCGTTGGC ATGATTACCA TCTGGACCAT TATCTTGGTT
GCTCAGTATA AATTCCGGCG GTCAAAAACC CAAGCAGAGG TAGATAAACT AAAGTTCAAG
TTGCCTTTTT GGCCCTACTC CATCTATTTC ACCCTGGGCT TTATGGCAAT GGTTTGTTTG
TTGATGGCCT TTATGGAAGA AACCCGTATA GCCCTATATG TAGCACCAGT CTGGTTTGCG
GTACTTTACG CTGGGTACAA GCTTCGGCGT ATAAATAAAA AATGTATACC TGTTATAGGC
GAATCTACCC AGGGCAACTC ATAA
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| Protein sequence | MDNHSNENKP LQRGLKNRHI QMIALGGGIG SGLFYGSAPA IKLAGPALTL GYLLGGLIAF
AIVRALGELA VEEPVSGSFS YYANKYISSF AGYLTGWTYW FLWIVIGMVE ITVVGVYVNF
WFPDIPQWLS ALGVLALITG VNLTTVKSYG EFEFWFSLIK VVTVVGMIVI GVFMIIFGLG
VGQPLGFDNF IVNGGFMPNG IQGLLMALVL VMFSLGGVEL IGVTAGEADN PDKTIPKAIN
NVIWRILIFY VLAIAIMLLL CPWNEIGTQG SPFVIVFDKM GIPAAAGIIN FVVLTAALSA
FNSCLFSTGR MLYNLASQNH APKIFGRLSK SSTPSIGILF SAFFLLIAVV LNYFMPEKVF
MYISSIATVG MITIWTIILV AQYKFRRSKT QAEVDKLKFK LPFWPYSIYF TLGFMAMVCL
LMAFMEETRI ALYVAPVWFA VLYAGYKLRR INKKCIPVIG ESTQGNS
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