| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3223 |
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| Symbol | |
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| ID | 4957431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3504000 |
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| End bp | 3506192 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640182411 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001114550 |
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| Protein GI | 134301054 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAA GTTTGGTATT AGCAGAAAAG CCCTCTGTGG CAAGGGACAT AGCCAGGGTT
TTAAACTGTT ATAAAAAAGG AAATGGTTAT TTAGAAGGGG ACAAATATAT TGTCACCTGG
GCGTTGGGCC ATCTGGTTAC TTTGGCCGAC CCGGAGGTCT ATGATGAAAA ATATAAGTCC
TGGCGATTAG AAGATTTACC CATGCTGCCC TCCCCTTTGA AACTGGTGGT TATCCGGCAA
AGCAGCAAGC AGTTTCAGAT CGTTCGGGAG CAAATGAACA GGAAAGATCT GCGAGAGATC
ATTATTGCCA CGGATGCCGG GCGAGAAGGG GAACTGGTGG CCCGGTGGAT TATTGAAAAG
GCTAGGGTGG TCAAACCCCT GAAACGCCTG TGGATTTCCT CGGTCACAGA CAAGGCCATT
CAAGACGGCT TTAAAAAGCT AAGGGATGGT AAAGAGTATC AAAATCTTTA TGCAGCGGCG
GTGGCCCGGG CAGAGGCAGA CTGGTTTGTA GGCATTAACG CCAGCCGTGC CCTAACTTGT
AAATTCAATG CACAACTTTC CTGCGGCAGG GTCCAAACCC CAACCCTAGC CATCATTGCC
AAGCGGGAAG AGGAAATAAG AAACTTCAGA CCCAAAACCT TTTACGGTAT AACTGTCGTA
ACAGACCAAC TAAAATTAAC CTGGCAGGAC CGTCAGAGTA AAGATATAAA GACCTTTCAT
AAAGAGCACT GTGATCAGGT GCTGTCCTTG TTAAATCAGA AAACCGCAGA GGTCATTGAG
GTAGAGAAGA CGGCCAAAAA GAGTTATTCG CCTCAACTAT ACGATCTAAC TGAATTGCAG
CGGGACGCCA ATAAATTCTT TGGCTATTCG GCCCGGGAAA CCCTATCCAT TATGCAGCGC
CTTTACGAGC ATTATAAGGT GCTGACCTAT CCGCGGACAG ATTCCCGCTA TCTTTCCTCG
GATATGGTGG ATACGCTGGC AGAAAGACTC AAGGCCTGCA GTGATCAGCC CTATACCAAA
TTGGCTTATA AGATTCTAAA AAACCCCATA AAACCCAGCA AGTCCTTTGT GGATGATAAC
AAAGTGTCTG ATCATCATGC TATTATTCCC ACAGAACAGC CTGTGACGGT CAGCACCTTC
AGTGATAAGG AAAGAAAAAT CTATGATTTA GTTGTAAGAC GTTTTTTAGC TGTTTTGTAT
CCGCCCTTTG CCTATGAGCA AACCACCATC AAAGCAAAAA TGGGGGAAGA GCTTTTTATT
GCCAGGGGTA AAGTGGTAAT TGCCCAGGGC TGGAAAGAAG TTTATCAGCA TGATTTAGAG
GAAGAGGAGC CCAAGGATAG TCTTAGCGAA CAAACTTTAC CCGTTATCAA ACGAGGTGAT
TGTTTAAAAG TACGCTCCCT AACCCAAACC AAGGGGGAGA CCAAACCACC GGAACCCTTT
ACCGAGGGCA CATTGTTATC AGCCATGGAA AACCCCGCAA AATATATGTC CCAGGATAAT
AAAGAGTTAA TCAAGACTCT AGACAAAACC GGAGGCCTGG GCACAGTGGC CACAAGGGCG
GATATTATTG AAAAGTTGTT TAATAGCTTC CTGATCGAGA AGAAGGGAAA GCATATTGCC
ATAACCTCCA AAGGAAAGCA ACTGTTGGAA CTGGTCCCAG AGGGGTTAAG GTCCCCGGCT
TTAACTGCTC GCTGGGAAAA AGAGCTGGAG TTCATTGCAA AGGGTATACT AAATAAAAGC
CAGTTTATCA ATGAGATAAA AAAATATGCC ACAACAGTGG TTCACGAGAT TAAAGAGAGT
GAAAATAGAT TCCGGCACGA TAACTTAACC GGAACCAAAT GTCCGGAATG TGGCAAACGG
ATGTTGGAAG TGAACGGAAA AAAAGGCAAG ATGCTGGTTT GTCAGGATCG GGAATGTGGC
TATCGCAAAG GCCTTAGCAA AGTAACCAAT GCCCGGTGCC CCGAATGTCA CAAACGACTG
GAATTGCATG GTGAAGGAGA AGGACAAATC TTTGTCTGTA AGTGTGGCTA TCGAGAGAAA
CTCACGACCT TTCATGAAAG AAGAAAAAAT GAAAAGGGCA GTAACATTTC TAAAAAGGAT
GTAAACAAGT ATCTGAGAAA TCAAGAGACA AAGGATGATT TTTTAAACAA TCCCCTTGCC
GAAGCACTGG CTAAACTTAA GCTTAAATCA TAG
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| Protein sequence | MHKSLVLAEK PSVARDIARV LNCYKKGNGY LEGDKYIVTW ALGHLVTLAD PEVYDEKYKS
WRLEDLPMLP SPLKLVVIRQ SSKQFQIVRE QMNRKDLREI IIATDAGREG ELVARWIIEK
ARVVKPLKRL WISSVTDKAI QDGFKKLRDG KEYQNLYAAA VARAEADWFV GINASRALTC
KFNAQLSCGR VQTPTLAIIA KREEEIRNFR PKTFYGITVV TDQLKLTWQD RQSKDIKTFH
KEHCDQVLSL LNQKTAEVIE VEKTAKKSYS PQLYDLTELQ RDANKFFGYS ARETLSIMQR
LYEHYKVLTY PRTDSRYLSS DMVDTLAERL KACSDQPYTK LAYKILKNPI KPSKSFVDDN
KVSDHHAIIP TEQPVTVSTF SDKERKIYDL VVRRFLAVLY PPFAYEQTTI KAKMGEELFI
ARGKVVIAQG WKEVYQHDLE EEEPKDSLSE QTLPVIKRGD CLKVRSLTQT KGETKPPEPF
TEGTLLSAME NPAKYMSQDN KELIKTLDKT GGLGTVATRA DIIEKLFNSF LIEKKGKHIA
ITSKGKQLLE LVPEGLRSPA LTARWEKELE FIAKGILNKS QFINEIKKYA TTVVHEIKES
ENRFRHDNLT GTKCPECGKR MLEVNGKKGK MLVCQDRECG YRKGLSKVTN ARCPECHKRL
ELHGEGEGQI FVCKCGYREK LTTFHERRKN EKGSNISKKD VNKYLRNQET KDDFLNNPLA
EALAKLKLKS
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