Gene Dred_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3204 
Symbol 
ID4957329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3484773 
End bp3485783 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content46% 
IMG OID640182392 
Productmembrane lipoprotein lipid attachment site 
Protein accessionYP_001114531 
Protein GI134301035 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0443411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TAAAAATAAA GGTCTTTTGT CTGCTGGCTT GCCTGTTGCT GTTGTTCACT 
GGCTGTGCTC AGGAGAAAAA GGAAGCACCG GAGCAAAAGC CAAAGAAAGA ACTAAAAAAA
GTCACGGTGA TGCTGGATTG GTTTCCCAAT ACTAATCATA CCGGACTCTA CGTAGCGAAG
GATAAGGGGT TCTTCAAAGA AATGGGACTG GCTGTTGAAA TTATACAGCC TGGCGAAGGC
ACTACCGCAG ACCAACTGGT GGCTTCAGGT AAAGCTGATT TTGGGATAAG TTATCAAGAA
AGTGTTACCC AAGCTCGGTC CACCGGCATT CCCCTGGTGT CCGTGGCAGC AATTATCCAG
CATAATACTT CTGCCTTTGC TTCACTTAAG GAAGCAAACA TCAATTCCCC CAAAGATTTT
GCAGGTAAGC GATATGGTGG TTGGGGCTCC CCGGTGGAGG AAGCCGTTAT CAAGGCTGTG
ATGGAAAAGG CTGGTGCCAG TCCTGAAAAG GTGCAAAATA TAACTCTGGG TGCCACGGAT
TTTTTCAACT CCATTGGGCG GGATGCTGAT TTTGAATGGA TCTATTATGG CTGGGATGGT
GTGGAAGCCC AAAGGAGGGG TATGGACCTA AATCTAATTA TGCTGAAGGA TTTAGACCCG
GCCCTGGACT ACTATACCCC GGTTATTGCA ACAAATGAAC AACACATTTC CGAACAAAAG
GAACTGGTTA AAAAATTTAT GGCTGCCACA GCCAAAGGCT ACCAGTGGAG TATTGAAAAT
CCTACTGGAG CCGCAGAAAT ACTATTAGAG AATGCACCTG AATTGAATGC CGATCTGGTA
AAAGCCAGTC AGGGGTGGGT AAGCCAAAAA TATCAGGAAG ATGCCCCACG ATGGGGGGAA
CAGAAGGAAG AAGTTTGGGC CCGTTATGCC GATTGGATGT TTCAACGGGG TTTGATTGAG
AAAAATATAA ACCCGAAAGA GGCCTTTACC AATGAATTCC TTCCCCAGTA A
 
Protein sequence
MKRIKIKVFC LLACLLLLFT GCAQEKKEAP EQKPKKELKK VTVMLDWFPN TNHTGLYVAK 
DKGFFKEMGL AVEIIQPGEG TTADQLVASG KADFGISYQE SVTQARSTGI PLVSVAAIIQ
HNTSAFASLK EANINSPKDF AGKRYGGWGS PVEEAVIKAV MEKAGASPEK VQNITLGATD
FFNSIGRDAD FEWIYYGWDG VEAQRRGMDL NLIMLKDLDP ALDYYTPVIA TNEQHISEQK
ELVKKFMAAT AKGYQWSIEN PTGAAEILLE NAPELNADLV KASQGWVSQK YQEDAPRWGE
QKEEVWARYA DWMFQRGLIE KNINPKEAFT NEFLPQ