Gene Dred_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3202 
Symbol 
ID4957344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3483321 
End bp3483962 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID640182390 
Productthiamine pyrophosphokinase 
Protein accessionYP_001114529 
Protein GI134301033 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA ACAGAACGTT AATATTTTCC GGGGGTAACC TGGGGTCCTG GGCTTTAAAG 
AAAATAGCGC CGGGAGATTT TCTTTTAGGT GTTGATCGGG GGGCCTATTT TCTCATCGAG 
AACGGTATAT CCCCGGATAT GGCCATAGGG GATTTTGATT CGGTAACCCA CAGCCAATTG 
GCTAGGATAA AGGAAGAAAG CAAAGAATAT TTATCCTGTG ATCCGGTTCA GAAGGATGAG 
ACCGATACGG AAATGGCCTT TAACTGGGCG TTACAACGCA AACCTGGGGA AATTATCCTG 
CTGGGTGTTT TGGGAGACCG CTTTGACCAC AGTCTGGCCA ATATTCACTT ATTGGCCAAG 
GCCTTACAGG AAGGGGTCCC TTGCTGCATT GTTGATGAGA AAAATGAGAT TTTTCTCATC 
AAGGATCAGG CAATAATAAA GAAGGATCAA TTCACACAGA TATCTTTGCT CCCCCTGACC 
CAGCAAGTTA CAGGCATTAC CCTCACAGGG TTTCAATATC CCCTGTATAA TGCGACACTG 
GTGGTTGGAC ATTCCCTGGG AATCAGCAAT GTACTGTCGG GGGAGACGGG TAAAATTGAG 
CTGGCCAGCG GCCTGTTGCT CATTATCAAA AGCAAAGACT GA
 
Protein sequence
MTQNRTLIFS GGNLGSWALK KIAPGDFLLG VDRGAYFLIE NGISPDMAIG DFDSVTHSQL 
ARIKEESKEY LSCDPVQKDE TDTEMAFNWA LQRKPGEIIL LGVLGDRFDH SLANIHLLAK 
ALQEGVPCCI VDEKNEIFLI KDQAIIKKDQ FTQISLLPLT QQVTGITLTG FQYPLYNATL 
VVGHSLGISN VLSGETGKIE LASGLLLIIK SKD