Gene Dred_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3196 
Symbol 
ID4957216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3477641 
End bp3479068 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content47% 
IMG OID640182384 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_001114523 
Protein GI134301027 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCAATA CATATAAGAT TCCCCGTCTA CTGGTTGGGG CACCCCAGGG ACGTTCCGGC 
AAGACGACCA TAACCGTTGG ATTAATTGCT GCATTAATCG GCCAAGGTTT GCATGTACAG
CCATTTAAAA AAGGACCTGA TTTTATTGAT CCCAGTTGGT TAACAAAGGT AGCCGGCCAT
ACCTGTCGTA ATTTAGACAG CTATTTGATG GAAAGGCAAT CCATTCGACA AAACTTTATT
CGACATGCCC AGGCTGCGGA TATTGCCATT GTTGAAGGGG CCATGGGTTT GTTTGATGGG
GTCGATATTC AGGGAAGCGG TAGTGCTGCA GAAATTGCCA AGATTTTGCA GGCACCGGTG
TTGTTGGTGA TAAATTGCAC CAGAATGACC CGTAGTGTAG CGGCCATGGT TAATGGATAT
GCTAATTTTG ACCCCAATGT AAAGATTGGT GGAGTTATTC TAAACCAAGT GGCTAGAAGT
CGCCATGAAA AAATGCTGCG GTCCTCCATA GCAGAATACT GTGACGTACC GGTACTGGGT
GCTATGCCTA AGGGTACACA GTTTACCATT CCAGACCGTC ACTTGGGATT GATTCCTGCG
GGTGAAAATG ATGCCCTCAT GGAGTCAGTA AAAAAAATCG GAGAGGCCGC TGCACAGTAC
CTGGATATAG AAGGGATTCT TAAAATGGCC CAGGAGTGGC CGGGAATTGT AGAGGAACAG
GTTATTCAGA AACCTATTGA AATAGAATGG ATTAAACAGG ATACTTCCAA TCAAAGATCT
AATATTCCGG TCATAGGGGT GATCCGGGAT CGTTCCTTTT CCTTTTATTA TCCTGAGAAT
TTAGAAGCAC TGGTGGAGGC TGGTGCCCAA CTGGTAGAAG TCAGTGCAAT ATCAGATCCC
GAACTGCCAG TCATTGACGG GCTGTACATC GGAGGCGGCT TCCCGGAGGT TTTGGCCCGG
GAGTTAGAAG AGAACCATTC TTTCCGGCAG CACCTGAAGC AGCTGATTGA GCAGGGCTTA
CCCGTCTATG CTGAGTGCGG GGGACTCATG TATTTGGGAC GCCGTATCCA CTGGGAAGGA
CAATCCTTTA AAATGGTAGG AGCGCTGCCT CTGGAGGTGG AAATGATCAA GAAGCCCCAG
GGGCATGGTT ACATGCATCT GGAAGCACTG CCAGGTACCC CCTATTTTGC CACCGGTAAA
ATTGTGAAGG GACACGAATT TCACAACTCC AGAGTGACTG ACTTGGATAC AAGTGGTTGT
GACTTTGCCT TTAAGGTTCT GAGAGGACAC GGTATAAACG GCCAATACGA CGGGATTCAC
TATAAAAATG TCTTGGCCTT GTATAATCAC ATTCATGCTG TGGCAGAAAC AGATTGGGCC
CACCATTTCG TAAAGATGGC CGAAAATTGG CGCAGGGAGA GAAAATAG
 
Protein sequence
MSNTYKIPRL LVGAPQGRSG KTTITVGLIA ALIGQGLHVQ PFKKGPDFID PSWLTKVAGH 
TCRNLDSYLM ERQSIRQNFI RHAQAADIAI VEGAMGLFDG VDIQGSGSAA EIAKILQAPV
LLVINCTRMT RSVAAMVNGY ANFDPNVKIG GVILNQVARS RHEKMLRSSI AEYCDVPVLG
AMPKGTQFTI PDRHLGLIPA GENDALMESV KKIGEAAAQY LDIEGILKMA QEWPGIVEEQ
VIQKPIEIEW IKQDTSNQRS NIPVIGVIRD RSFSFYYPEN LEALVEAGAQ LVEVSAISDP
ELPVIDGLYI GGGFPEVLAR ELEENHSFRQ HLKQLIEQGL PVYAECGGLM YLGRRIHWEG
QSFKMVGALP LEVEMIKKPQ GHGYMHLEAL PGTPYFATGK IVKGHEFHNS RVTDLDTSGC
DFAFKVLRGH GINGQYDGIH YKNVLALYNH IHAVAETDWA HHFVKMAENW RRERK