| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3180 |
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| Symbol | |
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| ID | 4957254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3459254 |
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| End bp | 3460195 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640182368 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001114507 |
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| Protein GI | 134301011 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000448923 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTAAGA AGATCATTAC AGGCATTGTC ATCGGGGTTG TACTGTTTTC CCTGGCGGTG
GCTATAGCCT TGAAAGGCAA TGGGGGCAAA ACGGCCGAAA ATACCGGAGT GGGAGAACAA
ATTGCAGTGG TACATATAGA AGGAACCATT ATGTCTTCTG CCCCAGGTGG TTTCGGCACA
GCAGGTGTGG CTGCCGCAGA TCGTATTGTT AGCGAATTAA AAGAAGCCCG GGAGAACCCG
GAAATTAAGG CCGTTATATT AAAACTGAAC ACCGGCGGGG GCACTGTGGT GGGTTCTGAT
GAAATTGGCA GAGAAGTGGA GCGAGTACGT AAGTCTGGCA AAAAAGTTGT GGCGGCCATG
GGAGAGATGG CGGCTTCCGG TGGCTACTGG ATCTCCTGCA AGGCCGATAA AATCGTAGCA
AACCCGGGAA CTTTCACCGG CAGCATCGGT GTGATTATGC AGCTAACGGA AATGAAAGAC
TTGTATAATA AACTGGGAGT GGAGGTCAAC AACATTAAGA CAGGGGCCTT CAAGGATATG
GGGGCCAGCA ATAAGGATCT TTCACCGGAA GAACGTCAGA TTTTTCAGGG ACTGGTTAAC
GACAGTTATG AAGATTTCAT ACAAGTGGTG GCAGCAGGAA GAAAGATGGA CCCGACCCAG
GTAAGGAAGT TGGCAGACGG CAGAATCTAC ACTGGCAAAC AGGCAAAACA GTTGGGGCTG
GTGGATGAAT TGGGGGATTT CAATGAAGCC GTAAGAATCA CTGCAAATTT AGCCGGTATT
AAAGGGGAGC CGGAGCTGGT AGACATGACC GGAGAACAAC TCCTATGGCA ACAATTATTT
GGCGGCCTGC AAGGCAAAAA TAAAATCTTA CCAATCCCTC TGGAGGGCCT ACTTTTATTA
CCTGATAAGG TAGTAATGCC CATAAATACC AATATACAGT AA
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| Protein sequence | MRKKIITGIV IGVVLFSLAV AIALKGNGGK TAENTGVGEQ IAVVHIEGTI MSSAPGGFGT
AGVAAADRIV SELKEARENP EIKAVILKLN TGGGTVVGSD EIGREVERVR KSGKKVVAAM
GEMAASGGYW ISCKADKIVA NPGTFTGSIG VIMQLTEMKD LYNKLGVEVN NIKTGAFKDM
GASNKDLSPE ERQIFQGLVN DSYEDFIQVV AAGRKMDPTQ VRKLADGRIY TGKQAKQLGL
VDELGDFNEA VRITANLAGI KGEPELVDMT GEQLLWQQLF GGLQGKNKIL PIPLEGLLLL
PDKVVMPINT NIQ
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