Gene Dred_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3171 
Symbol 
ID4957230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3450393 
End bp3451271 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content44% 
IMG OID640182359 
Producthypothetical protein 
Protein accessionYP_001114498 
Protein GI134301002 
COG category[R] General function prediction only 
COG ID[COG3872] Predicted metal-dependent enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000104727 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTC AATATGGTGG TCAGGCTGTT ATTGAGGGTG TCATGATGCG TGGACCAGGC 
AGCCGAGCCA TAGCTGTCAG GCGTCCTGAC GAAAGCATTG TTATCAATGA AAAAAAGCTT
GGTTCTATAA CAAAAAGATT TCCCTTTCTC AAACTTCCCT TTATTCGGGG TGTTGTTATG
CTGTTTGAAT CCCTTGTAAT GGGGATTGAA GCCCTAAGCT ATTCAGCGGA ACAGGCCATG
GGGGAAGAAG AAGAGGAAAA ACTCAGCAAA TGGGAGATGT TTTTAACCAT AGCGGTTTCC
CTGGGTTTGG CCATTGTCTT GTTTATTGTC ATTCCCACCA CTTTAACCTA TTATACCGCC
ACTTCTATTC AGGATAATTT TTTTCGGAAT ATCATCGAAG GGGTTATCCG ATTGGCTGTA
TTTTTGGGAT ATGTATATGC TGTATCACGG ATGAAGGATA TCCAACGGGT CTTTATGTAC
CATGGGGCAG AACATAAAGT GATTAATGCC TACGAAGCTG GCAAAGATTT AACAGTAGAA
GAAGTGCAGA AGTTTTCTAC CCTGCACCCC CGCTGTGGTA CCAGCTTTCT ACTCATCGTT
ATACTGATAA AAGTGGTTAT CTTCTCTGGA GTAACGGCTT CGGGATTAAT GGGTCAGATT
TTCTTTCGCA TCCTCCTTCT GCCGGTGGTG GCCGGTGTGG CCTACGAACT TTTAAAACTG
TCTGGGAAAT ATCAGGATAA AGGCATCTGT CGTATCTTTA TTGCCCCCGG ACTCTGGTTA
CAGAAGCTGA CCACTCGGGA ACCCGAGAAC AGTCAGGTAG AAGTTGCAAT AAAAGCCTTA
AATGCAGTCC TTAAGGAAGG TGACATTCAT GTACGATAA
 
Protein sequence
MSFQYGGQAV IEGVMMRGPG SRAIAVRRPD ESIVINEKKL GSITKRFPFL KLPFIRGVVM 
LFESLVMGIE ALSYSAEQAM GEEEEEKLSK WEMFLTIAVS LGLAIVLFIV IPTTLTYYTA
TSIQDNFFRN IIEGVIRLAV FLGYVYAVSR MKDIQRVFMY HGAEHKVINA YEAGKDLTVE
EVQKFSTLHP RCGTSFLLIV ILIKVVIFSG VTASGLMGQI FFRILLLPVV AGVAYELLKL
SGKYQDKGIC RIFIAPGLWL QKLTTREPEN SQVEVAIKAL NAVLKEGDIH VR