Gene Dred_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3161 
Symbol 
ID4957119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3440959 
End bp3441402 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content52% 
IMG OID640182349 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_001114488 
Protein GI134300992 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCCTT CCTGGGATGA ATACTTCATG GAAATTACCC GGGTGGTTGC CACCCGTTCC 
ACCTGTCTGC GCCGTAAGGT AGGTGCGGTC ATTGTTAAGG ACAACCGCAT TCTGGCCACC
GGCTACAATG GTGCTCCGGC GGGTCTTACC CACTGCTTGG AAATAGGTTG CCTGAGAGAA
AAATTGGGGG TCCCCTCGGG CCAACGCCAT GAACTATGTC GGGCCTTGCA CGCCGAACAA
AACGCTATTA TCCAGGCGGC GGTACACGGT ACGGCAATTC AGGGCAGTAT CATCTATGTA
ACGGATCAAC CCTGCGTCAT GTGCTCCAAA ATGATTGTCA ATGCGGGGAT TAAAAAAGTG
ATCTTTGCCG GCGACTATCC AGACGACCTC TCTTTGCAAA TATTTAAAGA AGCCTGTATA
GAACTGGTTA AAGCAACGAG TTAG
 
Protein sequence
MRPSWDEYFM EITRVVATRS TCLRRKVGAV IVKDNRILAT GYNGAPAGLT HCLEIGCLRE 
KLGVPSGQRH ELCRALHAEQ NAIIQAAVHG TAIQGSIIYV TDQPCVMCSK MIVNAGIKKV
IFAGDYPDDL SLQIFKEACI ELVKATS