| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3135 |
|---|
| Symbol | |
|---|
| ID | 4957067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3412635 |
|---|
| End bp | 3413720 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640182323 |
|---|
| Product | GDP-mannose 4,6-dehydratase |
|---|
| Protein accession | YP_001114462 |
|---|
| Protein GI | 134300966 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAG CATTAATAAC AGGTATTACA GGACAAGATG GAGCATATTT GGCAGAGTTT
CTATTACAGA AAGGTTATGA AGTGCACGGT ATAAAGCGTC GAGCATCAAT GTTTAATACT
GAAAGAATAG ATCATTTAGT TAAAGATATT CATGAAGAAG ATGTAAGATT AAAGCTTCAT
TATGGGGATT TAACAGATGC TACTAACTTA ATAAGAATTA TTCAAGAGGT GCAACCTGAC
GAAATTTATA ACCTTGCTGC ACAAAGTCAT GTTGCAGTTT CATTCGAATC TCCCGAGTAT
ACTGCAAATT CTGATGCTCT AGGAACACTA AGACTCTTAG AGGCTATTCG AATATTAGGA
TTGGCAAAGA AAACAAAGTA TTATCAGGCA TCAACGAGCG AATTGTTTGG AAAGGTTCAG
GAAACTCCAC AAAAAGAGAC AACTCCTTTT TACCCAAGAA GTCCATATGC AGCAGCAAAG
CTATATGGCT ATTGGATTAC TGTAAACTAC AGAGAGGCAT ACAATATTTT TGCATGCAAT
GGTATTCTAT TTAATCACGA ATCACCTCTT AGAGGAGAGA CATTTGTAAC CAGAAAAATT
ACCCGTGCTG TTGCCAGGAT AAAATTGGGC TTACAGAAGA AGCTTTATTT AGGAAACTTG
GATTCTAAAA GAGACTGGGG TTTTGCTGGA GATTATGTAA AAGCTATGTG GCTTATGCTT
CAACAAGATA AGCCCGAGGA TTTTGTTATA GCAACTGGGG AAACATACTC TGTACGGGAT
TTTGTTGAAC TGGCGTTTAA TCAAATTGGC ATTCAAATTG AATGGCGTGG TCAAGGTGTA
GATGAGATAG GAGTAGACAG TGGTACTGGT AATGTGCTGG TCTGTGTTGA CCCGAGATAT
TTTAGACCAA CCGAAGTAGA TTTCTTATTA GGAGACCCAA CTAAAGCACG AGAAAAGTTA
GGCTGGTATC CAGAAGTTAC TATTAACCAA CTGGCTAATA TGATGGTAGA AGAAGATTTG
AGAATAGCTA AACGGGATCT TTTATGTAAA AATAATGGAT TTGAAATTAA GAACGGACAT
GAATAA
|
|---|
| Protein sequence | MKKALITGIT GQDGAYLAEF LLQKGYEVHG IKRRASMFNT ERIDHLVKDI HEEDVRLKLH
YGDLTDATNL IRIIQEVQPD EIYNLAAQSH VAVSFESPEY TANSDALGTL RLLEAIRILG
LAKKTKYYQA STSELFGKVQ ETPQKETTPF YPRSPYAAAK LYGYWITVNY REAYNIFACN
GILFNHESPL RGETFVTRKI TRAVARIKLG LQKKLYLGNL DSKRDWGFAG DYVKAMWLML
QQDKPEDFVI ATGETYSVRD FVELAFNQIG IQIEWRGQGV DEIGVDSGTG NVLVCVDPRY
FRPTEVDFLL GDPTKAREKL GWYPEVTINQ LANMMVEEDL RIAKRDLLCK NNGFEIKNGH
E
|
|---|
| |