Gene Dred_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3132 
Symbol 
ID4957048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3408856 
End bp3409638 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content41% 
IMG OID640182320 
ProductABC-2 type transporter 
Protein accessionYP_001114459 
Protein GI134300963 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAATT ATTTCCAGCG AGTCTGGGCA GCAAGATACT TTTTTACTCA TCTTGCATTA 
TCTGACTTAC GTTCCAGATG GCGCCGATCC TTTTTTGGGA TCCTCTGGTC AATAATTCAG
CCTCTTGGTA TGACAGCATT GCTATCCATA GTGTTTAGTA AAATTTTTCA TACAGAGATA
CGTGAATATG CTCCTTATAT TCTCTCAGGC ATGGTGCTTT GGGATTTTGT AATTGCCACT
GCCATTGGAG GAGCTCTTTC TTTTGTTCAA GCAGATGCCT ATATTAAGCA GTGCAGACAT
CCACTAGCAA TCTACACACT TCGCACTACT TTAACTAATT TGATGGTATT GATGCTTTCC
AGCATTAGTC TGGTACTTTG GGTATTAGTA GTAATGCCAA AAAATTTTGG CTGGACATGG
TTAGCCGCTT TATCTATTTA TCCAATTGTT GCGCTTATTG TGTGGCCCCT AGCTACGGCT
TTAGCATACA TAGCAGTACG CTTCCGTGAT CTACCACATG CCCTGGGTTT AATTTTTCAG
GCTATGTGGT TTGTGTCACC AATATACTTT GAAGATAAAA TATTTCGCAA TGGAGATTTG
CATGCGCTGA TTGATTATAA CCCGATCTAC CACCTCTTGG AGCTTGTTCG TGCACCACTT
CTGCATGGGA AATGGCCTAC ATTTGAAAAC TATGCATACT GCTTGGGTAC AATGTTAGTT
TTTAGCTTTC TTGCTTGGAT TGTAGGAAGA CGTGCAGAGG AAAGGGTGAT CTTTTACCTA
TGA
 
Protein sequence
MSNYFQRVWA ARYFFTHLAL SDLRSRWRRS FFGILWSIIQ PLGMTALLSI VFSKIFHTEI 
REYAPYILSG MVLWDFVIAT AIGGALSFVQ ADAYIKQCRH PLAIYTLRTT LTNLMVLMLS
SISLVLWVLV VMPKNFGWTW LAALSIYPIV ALIVWPLATA LAYIAVRFRD LPHALGLIFQ
AMWFVSPIYF EDKIFRNGDL HALIDYNPIY HLLELVRAPL LHGKWPTFEN YAYCLGTMLV
FSFLAWIVGR RAEERVIFYL