| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3131 |
|---|
| Symbol | |
|---|
| ID | 4957046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3408104 |
|---|
| End bp | 3408859 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640182319 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001114458 |
|---|
| Protein GI | 134300962 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGC CATATATCTT GCTTGAAAAT GTTAACCTTC ACTACTCATC CGTTGCTTTT
AAAGAACGTT CTCTTAAGAC CCTTTTAGGG AATATTTTAA CGGGAAATAA AAAAAAGAAT
GCAGTACAAG ATGTCCATGC CCTTAAGAAT ATTAATCTGG AAGTCCGTGC AGGAGAGCGA
GTAGGGCTGC TTGGACACAA TGGTGCTGGA AAAAGTACCT TTCTCAAAAT GGCTGCCGAC
CTTTATCCTA TATCCAGCGG CCGACGCATT ATCAAGGGTA ATGTACGCTC TCTTTTTGAT
TTGAGCCTTG GTTTTGAACC AGATGCAACG GGAAGAGAAA ACATTTTTTA TCGAGGTCTT
TTACTTGGTT TATCACCCCG GTTACTTCGG GAGATCGAAG AAGAAGTAGT AGCTTTTGCT
GATCTGGGGG AGTTCATTGA TTATCCAATC AAAACCTACT CTGCGGGTAT GCAAGTTCGA
CTGGCCTTTG CTATCTCTAC CGCTGTGGGC GGGGATATCA TGTTAATTGA TGAAGTAATC
GGTGCGGGGG ACGCCAGATT TATGGTCAAA GCTAAAAAAA GAATTTTAGA TTTAGTGGAA
CAAGCTAAAA TCTTGGTTTT AGCCTCCCAT GACTTTAGTG CGTTGCAAAC TATTTGTCAG
CGAGGAGTAG TATTCCACCG AGGAGAAATT GTTTTTGATG GTGAGATAAC TGAAGCAGTG
AAAACGTATA AAAGAGTTAA TGGGATTGGA GCTTAA
|
|---|
| Protein sequence | MTSPYILLEN VNLHYSSVAF KERSLKTLLG NILTGNKKKN AVQDVHALKN INLEVRAGER
VGLLGHNGAG KSTFLKMAAD LYPISSGRRI IKGNVRSLFD LSLGFEPDAT GRENIFYRGL
LLGLSPRLLR EIEEEVVAFA DLGEFIDYPI KTYSAGMQVR LAFAISTAVG GDIMLIDEVI
GAGDARFMVK AKKRILDLVE QAKILVLASH DFSALQTICQ RGVVFHRGEI VFDGEITEAV
KTYKRVNGIG A
|
|---|
| |