Gene Dred_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3115 
Symbol 
ID4956996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3392126 
End bp3393985 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content51% 
IMG OID640182303 
Productheat shock protein 70 
Protein accessionYP_001114442 
Protein GI134300946 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.157677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATA GAAAAAATGA CGCTACCCGG CAATCCTTTC GTCCCATTGT AGGGATTGAT 
TTAGGAACAA CCAATTCGGC GGTGGCCTAT ATACACAATA GCAAGCCTGA AATTATTCCC
TCACCCCAGA GCAAGCACAT TATCCCGTCG GTTGTCCTGC TTGATCCAGA AGGTAAAGTT
GTCGTGGGGG AAGATGCCCG GGCTGCCCTG ATCGCTATGC CTGACCGCAC AGTGGCGGCG
GTGAAGAGGA AAATAGGCTC CCAGGAACCC ATTGCCATTG GCGGACAAGC CCTATTGCCC
CAGGAAATTT CAGCTTTGAT TTTAAAGGAA TTAAAAAGTT ATGTGGATGA TAGGTTTGGT
GAGGGTGAGA AGGAAGCAGT TATCACTGTG CCAGCTTATT TTACTGACGA ACAGCGCCGT
GCCACTAAAC AAGCCGGGGA ACTGGCAGGT TTTGTGGTGG AACGGATTAT TAATGAACCC
ACAGCCGCTG CCCTAGCCTT TGGACTGGCA CACATGGAAG AAGACCGGCA CATTCTGATT
TATGACCTAG GTGGTGGTAC CTTCGATGTT TCGGTGGTGG AAATGATGAG TGGAGTCTTG
GAGGTAAAGG CTTCCAGCGG CAACAGTCAT CTGGGCGGCG AAGATTTTGA CTGGCAGATT
GTAGACTGGC TGGCGGAGCA GATGATTGCT GAACACGGTG TTGATCCACG GGGTGACCTG
CGGGCCAGGG CCCTCCTTAA AGAAGAGGCC GAAAAAATCA AAATAAAATT ATCCACGGAA
GAAACCACTT CAGTAGCGTT GCCAGTGGTA ATGGTTCAGG ATAACTGTCC CATGGGACTC
CAACTGGAAT TTACCCGCAG TCAGTTTATT TCCTTGATAG ATAGCTACTT GCAGGAAACG
ATGGCCTGCG TACAGAGGGT GTTGACCGAT GCAGACCTTG GGCCCCAGGA TATCGACGAA
ATACTGCTGG TGGGAGGATC CACTAGAATT CCCCAGGTAC ACCAGCTAAT TCACCAATTC
TTCAAGAAGG AACCCCGCAG GGATGTGCAT CCCGACGAAG CAGTGGCCCT GGGTGCAGCG
GTTCAGGCAG GTCTTAAGTC CGGCGCCTTA TCCGACAGTG GCATGGTGGC TACCGATGTA
GCACCTTTTT CCATGGGTAT TGCGGTGTTA AAGGAATGGA AGGGTGTGGC CATGCGCCCC
GGTGGCTTCC ACGCCATCAT TCCTCGTAAC ACCACCGTAC CGGTAACTCG GACAGAACAG
TTTTACACCA CAGCCGATGG GCAAACCTCA GCCTCCATTG AAATATACCA GGGAGAGCAT
GGGTGGGTTA AAAACAATCA TCGGCTGGGA GAATTCCTGT TGGACGGCAT TCCCGCCAAT
GGGGCGGGGA AGGAAGCAGT TGAAGTAACC TACCGCTACA ATTTAAACGG TATTCTTGAA
GTGACTGCCA GATGTGTGTC CACGGGCAAA GAGATGACTG TTACGGTGCA GGACGCTTTG
GAGAGACATT CTCAGGAAGC CTTCCAGGAA AGTGCCGATA GGTTGGAAAA GCTCTTTGCC
GGTGCCCCAG ACGAAAATTT AGCTGAGGAA CAGTTTGAAG AGGCATGGGA ACTCTTCGAC
GATCAGGAGG ATGACGGTGC GGCAGATTAT GAGGAGCTTT CAGAAGGGGT ATTACAGCAG
GAAGCAGCCT CCTTGCGGTA CAGGGTTGAG AAATTGCTAG AGTCCCTCAC CGGGGCAGAC
CAGTCCAGGG CAGAGGAGAT GCTCCATCGG CTGGACGAGG CCATAGCGAC AAATGATCTT
GAAGAATTGC GCTCTGTGCT TGATGAGGTA ACAGATGTAC TGATTGATCT GGAAATTTAG
 
Protein sequence
MTNRKNDATR QSFRPIVGID LGTTNSAVAY IHNSKPEIIP SPQSKHIIPS VVLLDPEGKV 
VVGEDARAAL IAMPDRTVAA VKRKIGSQEP IAIGGQALLP QEISALILKE LKSYVDDRFG
EGEKEAVITV PAYFTDEQRR ATKQAGELAG FVVERIINEP TAAALAFGLA HMEEDRHILI
YDLGGGTFDV SVVEMMSGVL EVKASSGNSH LGGEDFDWQI VDWLAEQMIA EHGVDPRGDL
RARALLKEEA EKIKIKLSTE ETTSVALPVV MVQDNCPMGL QLEFTRSQFI SLIDSYLQET
MACVQRVLTD ADLGPQDIDE ILLVGGSTRI PQVHQLIHQF FKKEPRRDVH PDEAVALGAA
VQAGLKSGAL SDSGMVATDV APFSMGIAVL KEWKGVAMRP GGFHAIIPRN TTVPVTRTEQ
FYTTADGQTS ASIEIYQGEH GWVKNNHRLG EFLLDGIPAN GAGKEAVEVT YRYNLNGILE
VTARCVSTGK EMTVTVQDAL ERHSQEAFQE SADRLEKLFA GAPDENLAEE QFEEAWELFD
DQEDDGAADY EELSEGVLQQ EAASLRYRVE KLLESLTGAD QSRAEEMLHR LDEAIATNDL
EELRSVLDEV TDVLIDLEI