| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3106 |
|---|
| Symbol | |
|---|
| ID | 4956976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3379534 |
|---|
| End bp | 3380589 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640182294 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001114433 |
|---|
| Protein GI | 134300937 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000218303 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA AGATAGCAAC CTTTCTTGTG GGACTCCTGT GTTTGCTGTT CAGTGCCACA
GCGGCCTTGG CTGATACAAC CATGCCTCCG GAGTTACAAC AATTAATAAA CCAGCAGGCG
GAGCAAACCC TGGTGGAACA GCCCCCCAGC CTGGCCAGTG ATTACATTGC CGATATAACT
TACAATTTAG CCAGGGATGT ACAGAAACTT CCCAATGGTA ACTTATTGAT TTGCCGGGTG
GGGGCCTGGA TGCCCGGCGT CATGGAAGTG GATGCCCAGG GACAAGTGGT GTGGTCCTAT
TACGGCATTC AAGCCAATAG CGCCCGGGGC TTAGCCAATG GCAATATCCT GGTGGCGGAT
TCCGGTGCCC CGGGGGCCCC CTATGTGCCC CGGATATTAG AACTTAACCG GGATGGCAAA
AAAGTATGGG AATATGTGTT GCCTTCACTG GCCTATGCTC CCCGTTATGC TGAGAGGTTG
TCCAACGGCA ATACTTTGCT GGTCCTCCCC TTTGAGATCC GGGAAATAAC CCAGCAGAAG
AAGATTGTTT GGCAGTACGG CCTGGGCAAA CCGGGTAAGA CCGGGCAACC GGGAACCTTG
GTAAGACCAG TACGGGCCCA CCGCCTGGGG AACGGCAATA CATTGATTGT AGATCGGGGC
CATTACAAAA ATGGCAAGGT TTTTGAAGTT ACCCCGGGGA AAAAGGTGGT CTGGCAAATC
AGTGCCGCTG CAAATACTAC TGCCAGTGAA GAGGAGCAAA AACTCCCTGC TCTGGCAGCG
CCACTGGATG CATTGCGTCT GGAGGACGGA TCTACCCTGA TTACCGATAA AACACAGGAT
CAGATTTTTA CAGTGGATGC CCAGGGCCAA ATCAAGCAAG CCCGATCCTG GGCAGGTCTC
TATAAAACTG CCCCGGTAAC GGATTTATGG TGTGCGGAAC CGCAGGCCGA TGGCAATGTG
GTGCTTGCCG CCACCATGGT CAGTGGCCGC AGTCGGGTGG CCGAGGTGAT TGGTGAGACC
TTGAAAGTTG TTTGGAATGG TGCGGCAGAA CGATAG
|
|---|
| Protein sequence | MSNKIATFLV GLLCLLFSAT AALADTTMPP ELQQLINQQA EQTLVEQPPS LASDYIADIT
YNLARDVQKL PNGNLLICRV GAWMPGVMEV DAQGQVVWSY YGIQANSARG LANGNILVAD
SGAPGAPYVP RILELNRDGK KVWEYVLPSL AYAPRYAERL SNGNTLLVLP FEIREITQQK
KIVWQYGLGK PGKTGQPGTL VRPVRAHRLG NGNTLIVDRG HYKNGKVFEV TPGKKVVWQI
SAAANTTASE EEQKLPALAA PLDALRLEDG STLITDKTQD QIFTVDAQGQ IKQARSWAGL
YKTAPVTDLW CAEPQADGNV VLAATMVSGR SRVAEVIGET LKVVWNGAAE R
|
|---|
| |