Gene Dred_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3101 
Symbol 
ID4956947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3374293 
End bp3375159 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID640182289 
ProductUTP-glucose-1-phosphate uridylyltransferase GalU 
Protein accessionYP_001114428 
Protein GI134300932 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTAA GGAAAGCCAT TATACCGGCG GCGGGTTTGG GTGTACGGTT TTTGCCTGCC 
ACAAAGGCAA CTCCCAAAGA AATGTTGCCC ATTGTGGATA CCCCGACCAT TCAATACATA
ATTGAAGAAG CTGTGGCCTC GGGCATTGAA GATATATTAA TTGTAACTGG GCGGAATAAA
CGGGCCATTG AAGACCACTT TGACAAGAAT CTTGAATTGG AGATGCAATT GGACCATAAA
CAGAAACATG AATTGTTGGG TTTGGTTAAA GATATTAGTG AGATGGTGGA TATCCATTAC
ATACGTCAAA AGGAACCCCT TGGCTTAGGC CATGCCGTCT ATTGTGCCCG CAAGTTTATT
GGGGATGAAC CCTTTGCAGT GTTGCTGGGT GATGATGTCA TTCGGAGCAA AGTACCCTGC
CTAAAGCAAA TGATGAACCT CTATGAAGAA GTACGATATT CTATTCTAGG TGTTCAGGAA
GTGCCCCAGG AGCATGTGAA TCGTTATGGG ATTGTGGAGG CCACCACAGA GCAAGACAAT
GTCTGCCGCA TTTACGACCT AATAGAAAAA CCACAGATTG ATCAGGCTCC CTCTAGGTTG
GCTGTGATGG GAAGGTATAT ACTAAGTCCC AGAATCTTTG ATATCTTGGC CATGACCCGT
CCCGGGGCCG GTGGTGAAAT ACAATTGACC GATGCCCTAA GAAAGTTGGT GCAGGCCGAA
GCCATCTATG GCTGCATGTT CGAAGGAAAA CGTTATGATG TGGGCGACAA ATTGGGATAT
CTAAAGGCCA CCGTTGAGTT TGCCCTGGAA AGGCCGGACC TGTCAGAGGA TTTTAGGAAG
TACCTTAAGG AAATTGTATC AGAATAA
 
Protein sequence
MRVRKAIIPA AGLGVRFLPA TKATPKEMLP IVDTPTIQYI IEEAVASGIE DILIVTGRNK 
RAIEDHFDKN LELEMQLDHK QKHELLGLVK DISEMVDIHY IRQKEPLGLG HAVYCARKFI
GDEPFAVLLG DDVIRSKVPC LKQMMNLYEE VRYSILGVQE VPQEHVNRYG IVEATTEQDN
VCRIYDLIEK PQIDQAPSRL AVMGRYILSP RIFDILAMTR PGAGGEIQLT DALRKLVQAE
AIYGCMFEGK RYDVGDKLGY LKATVEFALE RPDLSEDFRK YLKEIVSE