Gene Dred_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3100 
Symbol 
ID4956940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3372526 
End bp3373986 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content48% 
IMG OID640182288 
Productphosphoglucomutase 
Protein accessionYP_001114427 
Protein GI134300931 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTCATA AAATTTCCTT TGGAACAGAC GGTTGGAGAG GGATTATAGC GAAGGACTTT 
ACCTTTGACA ATGTTAGGCT AGTGGCCCGG GCAGTGGCTG CCTATATAAA CGAAGAAGCT
ATTGGAGAGC GGGGAATTGT CATAGGCCGG GACAATCGAT TCCTGGCTGA AGAGTTTGCT
GAAGCCGTGG CGGAAGAGTT TAACAAACAG GGTATTCCGG TCTACATGTG CTGTGGTGCT
ACCCCGACGC CTGTTACCGC CTATGCCATC AAGCTCCATC AGGCGGCCGG TGCAGTGATG
CTAACCGCCA GCCATAACCC GCCGCCCTAT AACGGGTTTA AGTTTATACC GGAAACTGCC
GGACCAGCCT TGCCCCATAT CACCAAAAAG ATTGAAGAGA ATATCGCAAA GCTACAGGCA
GGGGAACCCT GTGAGGGTTA CTCCTTGATC CCCGCCGAAG GACGTTACGG AGCCCTGGTG
GCAGAGGAGA AACCAACCAC CGGCTGTACC ATGCACAGTC CCTTTGAGGA ATATATTGAG
CATATAGCCA CCATCATTGA TCTGGATACC ATCCGGCAAG CTGGTCTTAA AATCGTGATT
GATCCCATGT TTGGGGCAGG TATTGGCTAT CTGGAACATA TTCTGGGCAA TGCCGGTGCT
GAACTAGAGG TGTTCCACAA CCATAGGGAC CCTCTCTTTG GAGGAACTCT ACCGGAACCC
ACAGGTAAGT CCCTGGAGGA ACTAAAACAA CGCGTCACCG CGGGAAAAGC CCATTTGGGA
TTGGCCCTGG ATGGAGATGC AGATCGTTTC GGCATCATCG ATGCCAACGG AGAATACATT
ACTCCGAACC AATTTTTACC CTTGCTTTAC TACCACCTTC TCACCGTAAA GGGCTGGCGA
GGGCCAGTGG CCAGGACTGT GGCAACTACT CATCTACTGG ACAGAATGGC AGCAAAATAT
AACCAACCGA TTTATGAATC ACCTGTAGGC TTTAAATATA TTGGTCAAAA TCTTTTAGAA
AAAGACTGTA TTCTGGGTGG CGAAGAAAGC GGTGGTTTAT CCATCAAGGG CCATATACCG
GAGAAAGATG GTATCCTGGC AGGCTTACTG GCAGCAGAAA TGGTGGCCCA GCATGGCAAA
AGTTTGACGG CAATACTGGA AAGTATCTAC CAAGAGTTTG GCAGACTTTT TAGCGAAAGA
CTCGATATTC ATACTACACC GCAACAAAAA ACAGCAATTT TAGAACAATT AAAGGATTTT
TCCCCCACTG AATTAGGTGG TCAGCCAGTG ATTGATAAAA TTACCCTGGA TGGCGTCAAG
TTGATAGTTG CGGATGGGGC CTGGGTTCTC ATACGTGCCT CGGGTACGGA ACCCTTATTC
AGAATCTATA CAGAGGCCAA CAGTCTGGAA CAAAAGGTAA GACTACAACA GGATGTTAAA
AATAAGCTAG ATTTGAATTA G
 
Protein sequence
MSHKISFGTD GWRGIIAKDF TFDNVRLVAR AVAAYINEEA IGERGIVIGR DNRFLAEEFA 
EAVAEEFNKQ GIPVYMCCGA TPTPVTAYAI KLHQAAGAVM LTASHNPPPY NGFKFIPETA
GPALPHITKK IEENIAKLQA GEPCEGYSLI PAEGRYGALV AEEKPTTGCT MHSPFEEYIE
HIATIIDLDT IRQAGLKIVI DPMFGAGIGY LEHILGNAGA ELEVFHNHRD PLFGGTLPEP
TGKSLEELKQ RVTAGKAHLG LALDGDADRF GIIDANGEYI TPNQFLPLLY YHLLTVKGWR
GPVARTVATT HLLDRMAAKY NQPIYESPVG FKYIGQNLLE KDCILGGEES GGLSIKGHIP
EKDGILAGLL AAEMVAQHGK SLTAILESIY QEFGRLFSER LDIHTTPQQK TAILEQLKDF
SPTELGGQPV IDKITLDGVK LIVADGAWVL IRASGTEPLF RIYTEANSLE QKVRLQQDVK
NKLDLN