Gene Dred_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3091 
Symbol 
ID4956904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3356350 
End bp3358206 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content47% 
IMG OID640182279 
ProductIg family protein 
Protein accessionYP_001114418 
Protein GI134300922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCATG TGCAAAGGGT CTTTTGCCTA GTTGCTGTCA TTGTCATGCT TCTCCAATGT 
GGGGTGTCGG CCTTAGCAGC CGATTCCCTA CCGCCTTTAC CGGCGCTCTA TTGGGGGAGT
GTAAAAACTG CCACAGGCAA CCCAGTTATA TCCGGTGTGG TTGAAGCAGT TGTTGACGGG
GATGTGTGTG GTTCGATAAA CATCGATAAT GGTATGTTTG GATCAACTGG TACAGGGACC
AAATTGGTTG TACAGGGAGA CTTTGTTGGT AAGACAGTAC ATTTTCGTGT TAATGGGACC
GAATGTCAAC AAACAATTGC CTGGAAAAGC GACGATTGTC AAGAAGTTAA CCTGATAGTA
AATTTAACAG ACCCTCCGGT TAACCCATCT CCATTAATAT TTAATAGCGA TACACTATCC
GGGACAAAAG GTCAGCCATA TTCCTATAGT TTTGTTGTAT CCGGCGGGGC AACACCTTAT
TCCTTTGCCA TAACAGCAGG TAAATTACCA GACGGTTTAA CCCTTTCAAA CAACGGTGTA
ATAACCGGTA CACCCACGTC GACCGGGGAA TATAATTTTT CAGTGACGGT AACGGATAAA
CTAAATACAA AGGCTACACA AAGTTTTTCT CTAACTATTA ATCAGGCCTC TGTAACACCA
CCGGCTGGTG GCGGAGTATC TGGTGGAGGG GGCAGTGCTC CACAAACTAA GCAACCTTTA
AATACCATCA GTGATAAAGT CCTTCAAGCT GCCATCAGCC AGTCTGCCAA CACAGGCAAG
GTAACGGTTC AGGTCCCTGC TGGGGAGAGC CACTTAGCTT TATCCTTTGA CCAATGGAAA
GACATTCAGG GTACAGGCAA ACCGCTGGAA ACAAAGGTCA ACAATATAAC CATGGCCTTT
GCACCCGGTT CCCTAAAGGT TCCCCAATTA TCTTCGGGGG AATTGAATCA GGTACAGTTT
ACTGCTGCAC CAGTGGACAG AGATGAGGCA AAGGAAGCCA TTGCCCAGGC AAATCGGGGT
GGACTCTTCA ATATTGCCGG TGAAGTATTC GAACTTTCAG CCTGTGTTGT TTTAAAAGAT
GGCAGCCAAA AGAATATCAA ACAGTTCAAT GGTAAAATTC AAGTAAGCCT GCCAGTGCCG
CAAAGTGCCA GGGGCCAAGC TGCGGAGGGA CGGTTGACCG TCGGCTACTA TAATGAACAG
ACAAAGACCT GGCAGAATAT AGCTGGCCAA TATAATCCTG TTACGGGTAC CATTACCTTT
GAAACCAACC ATCTCAGTAA ATATGCTGTT ATAGAAGTGA AACAGGTACA AACAACTGTC
TTTAAGGATA TTGCCAATCA CTGGGCCAGA GCTGATATCG AGTTTATGGC AGACAAAGGA
TTTGTCGGTG GAGTTGGCAA TGGAGTGTTT GCCCCCGAGG CCAACATAAC CAGAGCGCAA
TTTGCTGCGT TCCTGGTCCG TATTCTTGAT GTGCCCCAGT CCAATACAGC CCTGAATTTT
ACAGATGTAA AAGCCGGAGA CTGGTACTAT GTACCGCTGG CCGCGGCTTA TCAAGCAGGT
CTAGTTAAAG GTGTAACCGC AGATAAAATT GCCCCCAACG AGAATATTAC CCGGGAGCAA
ATGGCTGTGA TGCTGGTTCG TGCTATGGAA GAGAAAGGGA AAACGATACC CTCTTCTTTA
GAGTTAACCT TCTCTGATAA AGGTATGGTT TCCCCTTGGG CGGTGGCAGG AGTATCCCAG
TCAGCCCAGC TTAGTCTAAT TGGTGGTTAT CCGAACGGAA CCTTTCAGCC CAGGGCCAAT
GCCACCCGGG CCCAGGCAAT TGTAATGCTG CACCGGCTAT ATGAGCAAAT ACAATAA
 
Protein sequence
MKHVQRVFCL VAVIVMLLQC GVSALAADSL PPLPALYWGS VKTATGNPVI SGVVEAVVDG 
DVCGSINIDN GMFGSTGTGT KLVVQGDFVG KTVHFRVNGT ECQQTIAWKS DDCQEVNLIV
NLTDPPVNPS PLIFNSDTLS GTKGQPYSYS FVVSGGATPY SFAITAGKLP DGLTLSNNGV
ITGTPTSTGE YNFSVTVTDK LNTKATQSFS LTINQASVTP PAGGGVSGGG GSAPQTKQPL
NTISDKVLQA AISQSANTGK VTVQVPAGES HLALSFDQWK DIQGTGKPLE TKVNNITMAF
APGSLKVPQL SSGELNQVQF TAAPVDRDEA KEAIAQANRG GLFNIAGEVF ELSACVVLKD
GSQKNIKQFN GKIQVSLPVP QSARGQAAEG RLTVGYYNEQ TKTWQNIAGQ YNPVTGTITF
ETNHLSKYAV IEVKQVQTTV FKDIANHWAR ADIEFMADKG FVGGVGNGVF APEANITRAQ
FAAFLVRILD VPQSNTALNF TDVKAGDWYY VPLAAAYQAG LVKGVTADKI APNENITREQ
MAVMLVRAME EKGKTIPSSL ELTFSDKGMV SPWAVAGVSQ SAQLSLIGGY PNGTFQPRAN
ATRAQAIVML HRLYEQIQ