Gene Dred_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3077 
Symbol 
ID4956850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3343055 
End bp3344053 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content52% 
IMG OID640182265 
Productpeptide chain release factor 2 
Protein accessionYP_001114404 
Protein GI134300908 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00097655 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGG ATGGTTTCTG GGACGACCTA ACATATAGCC AGAAAGTTAG TCAGAAACTT 
GCCGGATTAA AAGACAGGGT AGCAGCCTTT AACACCCTGG AGTCATCTTT ACAGGATCTG
GAGGTTATGC TGGAGCTTTG TCAGGAAGAG CAGGACCCTC TGCTGGAGGA GGAATTCAGC
TCCGAACTAA GTACTCTGAC CGGACGTCTT GAGGAGATGG AACTGGAAAT CATGCTAGCC
GGCCCCTACG ACCGGGGTGA TGCCATTTTG TCCCTGCATC CCGGGGCCGG GGGTACCGAG
TCCCAGGATT GGGCCCAGAT GCTCCTGCGG ATGTATACCC GTTATTGTGA GAACCACAAC
TACAAAGTAG AGATTTTAGA TCTGTTGCCC GGTGATGAAG CGGGGATTAA AAGTGCCACC
ATCCAGGTTA CCGGACCCAA TGCCTACGGC TATCTTCGTT GTGAAAAGGG TGTCCATAGG
CTGGTCAGGA TTTCACCCTT TGATGCAGCG GGACGCCGCC ACACCTCCTT TGCATCGGTG
GATGTTCTAC CGCTGGTGGA TGACGAAGTG GAAGTTAATA TTCGTCCGGA GGATCTAAGG
ATTGATACCT ACCGTGCCGG TGGGGCCGGT GGACAGCACG TAAACAAGAC AGACTCGGCG
GTTCGTATTA CCCACCTGCC CACGGGCATT GTGGTGGCCT GCCAGAATGA GCGGTCCCAA
ACCACCAACC GTCAGGCTGC CATGAAATTA CTAAAGTCCA AGCTGATTGA TTTGGAACTG
CAAAAGAAGG AAGATGAAAT GGCGGCCCTT CGAGGAGAAC AGAAGGATAT CGCCTGGGGT
AGCCAGATTC GTTCCTACGT GTTTCACCCC TATAGTCTGG CCAAGGATCA TCGCACCGGA
GAAGAAACAG GCAATGTCAA TGCGGTGATG GACGGAAATA TTGGCCAATT TGTAACTGCC
TACCTGAAAT ATATGGCCGG TAAGAAACAA GGTAGTTAA
 
Protein sequence
MLKDGFWDDL TYSQKVSQKL AGLKDRVAAF NTLESSLQDL EVMLELCQEE QDPLLEEEFS 
SELSTLTGRL EEMELEIMLA GPYDRGDAIL SLHPGAGGTE SQDWAQMLLR MYTRYCENHN
YKVEILDLLP GDEAGIKSAT IQVTGPNAYG YLRCEKGVHR LVRISPFDAA GRRHTSFASV
DVLPLVDDEV EVNIRPEDLR IDTYRAGGAG GQHVNKTDSA VRITHLPTGI VVACQNERSQ
TTNRQAAMKL LKSKLIDLEL QKKEDEMAAL RGEQKDIAWG SQIRSYVFHP YSLAKDHRTG
EETGNVNAVM DGNIGQFVTA YLKYMAGKKQ GS