Gene Dred_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3076 
Symbol 
ID4956832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3342017 
End bp3342868 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content47% 
IMG OID640182264 
Producthypothetical protein 
Protein accessionYP_001114403 
Protein GI134300907 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000401824 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCAA GATTTATAAA GGACACCTTA GGCGTTACCA TTGGTGTTAT TCTAACCGCC 
ATTGGGCTAG ATGCCTTTTT GGTCCCGGCA AAGATTGCTG CCGGGGGGTT GAGTGGTGTG
GCCACCATTC TCTATCATCT TTTTAATTTA CCCGTTGGTC TGATGATGTT ACTAATGAAC
GCGCCTCTCT TTATCTGGTC ATTTTTAAGG CTGGGCTCGA GATACACGGT TAATTCCATC
TATGGTACCG TTGCCTTATC CCTATTTATT GATTTACTGG CACCCTATAT ACCCTTGCTG
ACGGAGGATT TACTTCTGGC CTGTCTCTAT GGGGGTGTGC TAATGGGGAT TGGCTTGGGA
ATGGTCTTTC GATTCAATGG CACCACCGGT GGCACCGAAT TGCTGGCGGC CATTATTCGA
ACCTACATGG GGGTTAATAT AGGTCAACTG CTGTTCATCA TTGACGGAGT GGTGGTCATA
TGGGCAGGTT TTGTCTTTCG TTCGGCGGAA CTGGCCATGT ATGCCTTAAT TGCCATCTTC
CTTACAGCCT GGATCATCGA CCTGGTAATA GAAGGTTTTA GTTCTGACAA AGCCTTTATT
ATCATTACCC GGCGGGCAGA TACCATCAGC CAGGCTATTA TTAAAGATTT AGATCGCAGT
GCCACGGCCT GGAAGGCCCA GGGAATGTAC AGCGGCACAG AACAAGAAGT ACTTATATCC
GTTGTGGGCC GTTCCCAGGT GACCAGACTA AAGGATATTG TCAAAAGGGA AGACCCCCTT
GCCTTTGTCA TTCTGGCCAA TGTCCATGAA GTGTTGGGAG AGGGCTTTAA AGAGTTAGAA
ACTCAAAGTT AA
 
Protein sequence
MIARFIKDTL GVTIGVILTA IGLDAFLVPA KIAAGGLSGV ATILYHLFNL PVGLMMLLMN 
APLFIWSFLR LGSRYTVNSI YGTVALSLFI DLLAPYIPLL TEDLLLACLY GGVLMGIGLG
MVFRFNGTTG GTELLAAIIR TYMGVNIGQL LFIIDGVVVI WAGFVFRSAE LAMYALIAIF
LTAWIIDLVI EGFSSDKAFI IITRRADTIS QAIIKDLDRS ATAWKAQGMY SGTEQEVLIS
VVGRSQVTRL KDIVKREDPL AFVILANVHE VLGEGFKELE TQS