| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3069 |
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| Symbol | |
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| ID | 4956804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3334349 |
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| End bp | 3335596 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640182257 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001114396 |
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| Protein GI | 134300900 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000576298 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCCT TTACCGATAT AACACCGATT TTGTTTCAGA CCCTAGGGGC AGTTTTTATG
GAACCCCAGA TTCTAGAGTT ATTTCTTCTG GTGGTGGCTA TTGTGGCCCT GCAATATTAC
CGTATGGGAA GGGCAAAGGA AAAATTCTTT GGTTTGAAGC CACGGGGTGT CTGGCGAGAT
GTTTTGGCCG CCACCCTATT TGGCTTGCTG GGTGGGGTTT TGGCCAGTTA CATCATGGTA
TTCGTCGGCT TGACACTGTC CGATTCCGGG TTAATCTATC TCTGGCCCTT GGCCATTCTG
CTAATGTTTA TTGACGCCAG ATTTTTATGC TTTGCCTATG CCGGTGGCCT TTTGGCCTTG
AGTTCCATCG CCTTAGGTTG GCCGGAGGTT AGCATACCTC AGCTTTTGGG CCTGGTGGCC
ATTCTGCATT TTGCGGAAGC AGTTCTTATT CTGGTCAGTG GTCATTTGGG GGCCATGCCT
GTCTTTATTC GGAATGCAGA AGGCAAGGTT GTAGGGGGGT TTGCCCTGCA AAAATTCTGG
CCCATACCCC TGGTGGTTAT GGTTATTGTG GGTCAAACCA GTGGTGCTGC CGGGGGCATC
CACATGCCCC AGTGGTGGCC TTTAATTAAA GGGGACATGG GGGCAAATGT AGATAATGTG
ATCTATTCCC TTATGCCGGT GGTGGCAGGA CTGGGCTATG GAGACCTGGC CGTGGCCCGT
ACTCCTAAGC AAAAGGGCAG GATATCGGCA GTATTTCTGG GTTTATACAG TGTGATTTTG
TTGGCACTGG CGGTTTTGAC TGATCGCTAC CCTCTGGTGG GGGTTGCAGC GGCACTATTT
TCGCCACTGG GGCATGAAAT GGTGATCTAC CTGGGCAGGC GTCTGGAGGC CACCAACGCC
ATCTATAAGC CTGTGGATCA AGGGGTTAAG ATACTGGATG TGATTCCGGG CTATCCTGCC
TGGCAGGCGG GAATTCGTTC CGGGGATATT ATCAAGGAAG TAAACGGCAT GACAGTGGGA
AGCCGTCAGG GGTTAGAATT TGCCTTGGGT GTTTATCACC AGGTACAGAT TACCTACTAC
TCAATGGCCC AAAAAAAAGT ATACCGAGAG GGCATTGAAT TCAAAGAAAA GGATATGCTG
GGTGTGTTGC CGGTTCCCGA GGGTAATGAA GAAACCTTCA TGGAGCTATC CACCAACGGT
CCCCTGCGCA GGTGGTTCAA CAACCGTATT GCTAGGCATA GGAAATGA
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| Protein sequence | MFPFTDITPI LFQTLGAVFM EPQILELFLL VVAIVALQYY RMGRAKEKFF GLKPRGVWRD
VLAATLFGLL GGVLASYIMV FVGLTLSDSG LIYLWPLAIL LMFIDARFLC FAYAGGLLAL
SSIALGWPEV SIPQLLGLVA ILHFAEAVLI LVSGHLGAMP VFIRNAEGKV VGGFALQKFW
PIPLVVMVIV GQTSGAAGGI HMPQWWPLIK GDMGANVDNV IYSLMPVVAG LGYGDLAVAR
TPKQKGRISA VFLGLYSVIL LALAVLTDRY PLVGVAAALF SPLGHEMVIY LGRRLEATNA
IYKPVDQGVK ILDVIPGYPA WQAGIRSGDI IKEVNGMTVG SRQGLEFALG VYHQVQITYY
SMAQKKVYRE GIEFKEKDML GVLPVPEGNE ETFMELSTNG PLRRWFNNRI ARHRK
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