| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3065 |
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| Symbol | |
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| ID | 4956789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3327387 |
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| End bp | 3330257 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640182253 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001114392 |
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| Protein GI | 134300896 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000246359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACA AAATACTCAT CAAGGGTGCC CGGTCCCATA ATTTGAAAAA TATAGATGTG
GAAATCCCTA GGGACAAGCT GGTGGTAGTA ACCGGTCTGT CCGGTTCTGG TAAATCCTCC
CTGGCCTTCG ACACCATCTA CGCCGAAGGT CAGCGTCGCT ATGTGGAATC CCTTTCTGCC
TACGCCCGGC AGTTTCTGGG CCAGATGAAC AAACCCGATG TGGACTATAT AGAAGGGCTT
TCGCCGGCCA TTTCCATTGA CCAAAAGACC ACTAGCCATA ACCCTCGCTC CACAGTGGGT
ACCGTAACGG AAATTTACGA CTACCTGAGG CTGCTTTTTG CCCGGGCGGG CCGGGCCCAC
TGCCCCAAAT GCGGCCAGCC TATCACTCAG CAGACCGTAC AGCAAATGGT AGATCAACTG
ATGGCACTGC CCGAAGGCAC CAAGCTGCAA CTTCTGTCCC CGGTGGTTAG GGGTAAAAAG
GGAGAGCATG TTAAGATCCT CGAAGACATT AAGCGCAATG GTTTTGTGCG GGTTCGGGTG
GATGGAGAAA TTTACGATCT ATCCGAAGTT CCTCAGCTGG ACAAAAAAAA GAAACACAAC
ATCGAGATTG TGGTGGATCG CATTATTCTT CGCCCCGGCA CTGAAAAACG CCTGGCGGAC
TCCATGGAAA CAGCCCTCAA ACAAAGTGAA GGCATTGTCA TTGCCGCAGT GATTGATGGG
GAGGAATATA CCTTTTCCGA AAACTTTGCC TGCACCGACT GTGGCATTAA CATCAGTGAA
ATTAGTCCCC GGCTGTTCTC CTTTAACAAT CCCCACGGAG CTTGCCCCGC CTGTACCGGA
CTGGGGATTA ACCATGAGTT TGACCCGGAT ATGATTATGC CGGATAAAAG CAAAAGTATC
CGGGAAGGAG GCATTGAGGG CTGGCACAAG GGGAACATTG CCGCAGCCTA CCTATCCGGC
CTGGCAAAAC AATATGATTT TAGTCTGGAT ACGCCGGTGG AGAATCTTTC CACCAAACAC
ATGAAAGTGA TTCTCTACGG TACCGGCCAG GAAAAAGTTA AATTTGACTA TACCGATAGC
TACGGCCACA CCCACCATTA CGAAGTACCC TTTGAAGGAA TTATTGGCAA CCTCTCCCGG
CGTTACCGGG AAACCCAATC GGAAGCCATG CGAGAAGAGT TTGAAAAATA CATGAGCATT
AAACCCTGCC CCAGTTGTAA GGGTGCCAGG TTAAAGCCCG AGGCCCTGGC TGTGAAGGTT
GGGGGGAAAG ATATTGTAGA TATAACCTCC CTTTCCATAG CCGATGCACT GAAATTCTTT
AACAACCTGG ACCTCACCGA GCGGGAACGC ATGATTGCCC GGCAAATCCT CAAGGAAATT
AACGAACGAC TGGGTTTCCT GGTTAATGTG GGCCTGGATT ATCTAACGCT GGGACGCTCC
GCCGGGACCC TGTCCGGGGG AGAGGCCCAG CGGATTCGGC TGGCTACCCA AATTGGTTCC
GGTCTTATGG GTGTTCTCTA CATTCTGGAC GAACCCAGCA TCGGTCTGCA CCAGCGGGAT
AATGAAAGAC TCATAACCAC CCTGGAACGC CTACGGGATT TGGGCAACAC CCTCATTGTG
GTGGAACACG ACGAGGATAC CATCCGGGTG GCGGACCACA TCATTGATAT TGGCCCTCTG
GCAGGTCGTC AGGGGGGCCA GGTGGTGGCC GCAGGGACCA TGGAAGACAT TATGCAAGTA
CCGGAGTCCC TCACCGGCCA GTACCTTAGT GGTAAGAAAT TTATCCCGGT ACCCCTCAGT
CGACGCCTGG GCAAGGGACA GAGTTTGGTC ATTAAGGGGG CTACCGAAAA CAACCTGAAG
GGGATTGATG TGGAGATTCC CCTGGGTGGT TTTGTCTGTA TCACCGGGGT TTCCGGTTCC
GGTAAGAGTA CCCTGATTAA CGAAATCCTT TATAAATCCC TGGCCCAAAA ACTGCACCGG
GCCAAAAGCA AACCCGGTGA ACACAGCGGC ATCGAGGGCA TTGAACACCT GGAAAAGGTC
ATAGATGTAA ACCAATCTCC CATTGGTCGT ACCCCCAGAT CCAACCCTGC CACCTATACC
GGGGTTTTTA ACGACATTCG GGAACTCTTC ACCCAGATGC CCGAGGCCAA GGTGCGGGGC
TACAAAGCCG GACGCTTTAG TTTTAACGTC AAAGGGGGCC GCTGTGAGGC CTGCCAAGGA
GACGGTATCA TAAAAATTGA AATGCACTTC TTACCGGATG TCTACGTACC CTGCGAAATC
TGCAAAGGAC TGCGCTACAA CCGGGAGACC CTGGAAGTAA AATATAAAGG CAAAAGCATT
GCCGATGTAC TGAGTATGGA AGTGGATGAG GCGGTGGAGT TTTTTGCTAA CATTCCCAAA
ATTCACCGCA GATTAAAGAC CCTGCAGGAT GTGGGTCTGG GCTACGTGCG TCTGGGTCAA
CCGGCACCGG AGCTTTCCGG CGGGGAGGCC CAGCGGGTAA AACTGGCCAC CGAGTTGAGT
CGACGCAGCA ATGGAGGGAC CATCTACATC CTGGACGAGC CCACCACCGG CCTGCACACT
GCTGACATTG CTCGACTGCT GGAAGTACTG CACCGTCTGG TGGACAATGG CAGCACCGTG
GTGGTCATCG AACACAACCT GGATGTTATT AAGACCGCCG ATTATATCAT CGACCTGGGT
CCTGAGGGTG GCGACAAAGG AGGAACCGTA GTGGCAACCG GCTCTCCGGA AGAAATCTGT
CAGGTAGCTG CCTCCTACAC CGGCCATTTC CTAAAGCCAG TGCTGGAGCG AGACCGCCAG
CGCACCCTAC AGGCCCTGGA GAACGGCGAA GTTTCATCAA TCATAGCATA A
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| Protein sequence | MQDKILIKGA RSHNLKNIDV EIPRDKLVVV TGLSGSGKSS LAFDTIYAEG QRRYVESLSA
YARQFLGQMN KPDVDYIEGL SPAISIDQKT TSHNPRSTVG TVTEIYDYLR LLFARAGRAH
CPKCGQPITQ QTVQQMVDQL MALPEGTKLQ LLSPVVRGKK GEHVKILEDI KRNGFVRVRV
DGEIYDLSEV PQLDKKKKHN IEIVVDRIIL RPGTEKRLAD SMETALKQSE GIVIAAVIDG
EEYTFSENFA CTDCGINISE ISPRLFSFNN PHGACPACTG LGINHEFDPD MIMPDKSKSI
REGGIEGWHK GNIAAAYLSG LAKQYDFSLD TPVENLSTKH MKVILYGTGQ EKVKFDYTDS
YGHTHHYEVP FEGIIGNLSR RYRETQSEAM REEFEKYMSI KPCPSCKGAR LKPEALAVKV
GGKDIVDITS LSIADALKFF NNLDLTERER MIARQILKEI NERLGFLVNV GLDYLTLGRS
AGTLSGGEAQ RIRLATQIGS GLMGVLYILD EPSIGLHQRD NERLITTLER LRDLGNTLIV
VEHDEDTIRV ADHIIDIGPL AGRQGGQVVA AGTMEDIMQV PESLTGQYLS GKKFIPVPLS
RRLGKGQSLV IKGATENNLK GIDVEIPLGG FVCITGVSGS GKSTLINEIL YKSLAQKLHR
AKSKPGEHSG IEGIEHLEKV IDVNQSPIGR TPRSNPATYT GVFNDIRELF TQMPEAKVRG
YKAGRFSFNV KGGRCEACQG DGIIKIEMHF LPDVYVPCEI CKGLRYNRET LEVKYKGKSI
ADVLSMEVDE AVEFFANIPK IHRRLKTLQD VGLGYVRLGQ PAPELSGGEA QRVKLATELS
RRSNGGTIYI LDEPTTGLHT ADIARLLEVL HRLVDNGSTV VVIEHNLDVI KTADYIIDLG
PEGGDKGGTV VATGSPEEIC QVAASYTGHF LKPVLERDRQ RTLQALENGE VSSIIA
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