| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3060 |
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| Symbol | |
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| ID | 4956725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 3321619 |
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| End bp | 3322680 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640182248 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001114387 |
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| Protein GI | 134300891 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAT TGTTAAAAGT TCAGCAAAAA AAGAAAAATA TTTTATTTTT GTTTATTGGA
CTAATTGCTT TAACGACTCT AATCTTTGGC GGCTATTTTT ATAAAAATCA AGTATCCCTG
GCTAAGGAAC AGGATAGTCT GACAGCCACT GGAACCCTGG AGGCCACCAG TGTAATGGCT
TCCTTTAAGG TGCCGGGTCG CATTGATACG CTTTTGGTGG CTGAGGGGGA TCAGGTGAAA
AAGGGAGCTG TGCTGGCTGC CCTGGAAACC AAGGAACTGC AGGCTAAGTT GTCCCAGGCT
AAGGGTGCCC ATGAAGCGGC CCTGGCCGCC AGCCGCCAGG CCGAAGAGGC TGTACCCCTA
ACCAGCCAGC AGGTGGAAAC CACCATCGCC CAATGCAATG CCAAGGTGGA GCAGGCCACG
GTAAAAGTTC GCAGTGCCCA GCAACTTTAT GATCGGATGG TTGAGCTACA TAAAGCCGGT
GCCATCTCGG ATAGCCAATT TGATGATGCC ACCAACAATT ATGATGCCGC TAAGCAACAA
CTGGAAGAGG CTAAGGCGGC CCTGGCCCAG GCCGAAGCCG CCAGACTGAA GGTAGAAGTT
TCTCAGGCTC AGCATGATGC CGCCGTGGGG CAGGCCAATC AGGCCCAGGG GGCCGTTGAT
GAGGCCTCTG CCTATTTGGA AAACAGTAAA CTAAAGGCCC CCATGAACGG TTTCATTACC
CAAAAGTACC TGGAGCAGGG TGAAATGCTG AATGCCGGAA CCCCAGTCTT TGAAATAACC
GACCTAGTCA ACTCCTACGT CAAGGTGTTT ATCAGCGAAA AGAAAATTGG CCGGGTTCGT
CTGGGCCAAA AAGTAGAAAT TCGGGTGCCT GCTTTCCCGG ATAAGGTCTT TGAGGGGAAG
GTTGTGTTTA TTAATAACGC CGGGGAATTT GCTGTGAAAA AGGCGGTTAA TGAGCAGTAC
CAACATGATA TTCGCAGCTT CGAGGTAAAA ATTGATGTTC CCAACCAGGA TCTTCTCTTA
AAAGTCGGCA TGACCGCCAA TGTCAAGATA TTGGAGGAAT AA
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| Protein sequence | MDELLKVQQK KKNILFLFIG LIALTTLIFG GYFYKNQVSL AKEQDSLTAT GTLEATSVMA
SFKVPGRIDT LLVAEGDQVK KGAVLAALET KELQAKLSQA KGAHEAALAA SRQAEEAVPL
TSQQVETTIA QCNAKVEQAT VKVRSAQQLY DRMVELHKAG AISDSQFDDA TNNYDAAKQQ
LEEAKAALAQ AEAARLKVEV SQAQHDAAVG QANQAQGAVD EASAYLENSK LKAPMNGFIT
QKYLEQGEML NAGTPVFEIT DLVNSYVKVF ISEKKIGRVR LGQKVEIRVP AFPDKVFEGK
VVFINNAGEF AVKKAVNEQY QHDIRSFEVK IDVPNQDLLL KVGMTANVKI LEE
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