Gene Dred_3037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3037 
Symbol 
ID4956691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3296848 
End bp3297408 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content37% 
IMG OID640182225 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001114364 
Protein GI134300868 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA CCGATACTAA TTTAGATGGT GTAATTATTG TCGAACCAGC TGTATTTGGT 
GATCATCGTG GCTGGTTTAT GGAAACATAT AATGAATCTA AATTCTTAGA AGCAGGGTTA 
ACTTATAAGT TTGTTCAAGA TAATCAATCA TTTTCTGCAG TAAAAGGAAC GTTAAGGGGA 
ATACATTATC AACTCAATCC TAAGGCCCAG GCAAAATTGG TACGTTGCAT AAGGGGGGCT 
ATTTTTGATA TTGCTGTAGA TATTCGAAAA GGGAGTCCGA ATTTTGGTAA ATGGATTGGA 
ATTAAATTGA CGGCGGAAAA TAAAAAGCAA TTATTAATCC CAAGGGGATT TGCACATGGT 
TTCATGACTT TAACTGAAGA TGTGGAGGTT CAATATAAAG TGGACGAGCT ATATGCCCCA 
GAATTGGATC GGAGTATCCT ATGGAGTGAC CCTGTTATTG GAATTAAATG GCCTATGGAT 
ATTACGCCTC TATTATCAAC AAAAGATGAA AAGGCACCAT TACTAGAGGA TGCCGAGAAT 
AACTTCAGCT ATGGGGAGTA G
 
Protein sequence
MKFTDTNLDG VIIVEPAVFG DHRGWFMETY NESKFLEAGL TYKFVQDNQS FSAVKGTLRG 
IHYQLNPKAQ AKLVRCIRGA IFDIAVDIRK GSPNFGKWIG IKLTAENKKQ LLIPRGFAHG 
FMTLTEDVEV QYKVDELYAP ELDRSILWSD PVIGIKWPMD ITPLLSTKDE KAPLLEDAEN 
NFSYGE