Gene Dred_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3035 
Symbol 
ID4956689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3294903 
End bp3295991 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content32% 
IMG OID640182223 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001114362 
Protein GI134300866 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAGTA AAAAAATTCT TGTTACTGGC GGTGCAGGGT TTATTGGCAG TAATTTTGTT 
AAGCTAATAT TAAATAAGTA CCCAGAATAC AAAATTATAA ATGTTGATCT CTTGACGTAT 
GCAGGCAATT TGGAGAATTT AAAAGAAGTG TGTAATAAGC CAAACTATAC TTTTATTAAA 
GCGGATATTA GAGATAGAGA AATAATAGAT CATATATTTA GTAGATATAT AGATTCAGTA 
GTTAATTTTG CTGCTGAGTC CCATGTTGAT AGGAGCATTG AAGAACCGGA AGTGTTTTTA 
ACAACTAATG TAATAGGTAC TCAGGTTTTA CTTGATACTG CTAAAAAATA TTGGAAAATT 
AATCCGAATG ATAAATATTG TAAAGAATAT AAACATGGAG TTAAATTTAT TCAAGTTTCT 
ACGGATGAGG TATATGGCTC CTTAGGTGCT GAGGGTATGT TTGTAGAAAC AATGCCGTTA 
ATGCCTAATA GCCCATACTC GGCATCAAAA GCCAGCGCAG ATATGATTGT AAGAGCGTAT 
CATAAAACCT ATAGTTTGCC AATTAATATT ACTCGTTGTA GTAATAACTA CGGTCCATAT 
CAATTCCCGG AAAAATTAAT ACCACTTATA ATAAATAATT GTTTAAAAGG TAAAGAACTA 
CCTGTATATG GTGATGGTAT GCAGATTAGG GATTGGTTAC ACGTATCTGA TCACTGTTCT 
GCAATTGATG CTGTATTACA TAAAGGTGTA GACGGTGAGG TTTATAATGT AGGTGGAAAC 
AATGAGAAAG CTAACATAGA AATAGTTAAA CTAATTATTA AAACTTTGGG CAAATCCGAG 
GACTTGATTA AATATGTTAA GGACCGACCA GGACATGATA GAAGATATGC TATTGATAGT 
ACTAAAATAA CTAGTCAATT GGGATGGAAA CCAACTTATT CCTTTGAGCA GGGTATGAAA 
GAAACTATAG AATGGTACTT GAAAAATACA GATTGGATAA AGAATATTGT ATCGGGAGAT 
TATGTCAATT TTTTTGATAA GATGTATTCT AGAATAATTG ATGAAGTTGC TGGTGAAAAG 
GAGGATTAA
 
Protein sequence
MASKKILVTG GAGFIGSNFV KLILNKYPEY KIINVDLLTY AGNLENLKEV CNKPNYTFIK 
ADIRDREIID HIFSRYIDSV VNFAAESHVD RSIEEPEVFL TTNVIGTQVL LDTAKKYWKI 
NPNDKYCKEY KHGVKFIQVS TDEVYGSLGA EGMFVETMPL MPNSPYSASK ASADMIVRAY 
HKTYSLPINI TRCSNNYGPY QFPEKLIPLI INNCLKGKEL PVYGDGMQIR DWLHVSDHCS 
AIDAVLHKGV DGEVYNVGGN NEKANIEIVK LIIKTLGKSE DLIKYVKDRP GHDRRYAIDS 
TKITSQLGWK PTYSFEQGMK ETIEWYLKNT DWIKNIVSGD YVNFFDKMYS RIIDEVAGEK 
ED