Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_3033 |
Symbol | |
ID | 4956665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 3292559 |
End bp | 3293581 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640182222 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_001114361 |
Protein GI | 134300865 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA ACAGTACACT ATTAATAACC GGTGGTACAG GAAGTTTTGG TAATGCTGTA TTAAACCGAT TTTTAACTAC TGATATCTCT GAGATTCGCA TCTTCTCTCG GGACGAGAAG AAGCAAGATG ATATGCGTAA ACTCTATAAA AACGATAAAA TTAAATTTTA CATTGGTGAT GTTAGAGACA TTGCCAGTGT AAAAAACGCC ATGCATGGTG TGAACTATAT CTTTCATGCG GCAGCCCTTA AACAAGTGCC ATCCTGTGAA TTTTTCCCAT TGGAAGCAGT GAAAACTAAC GTGTTAGGAA CCGACAACGT ACTTACAGCC GCTATCGAGT ATGGGGTTAA AAAAGTAATT TGCTTATCTA CTGACAAAGC TGCATATCCT ATTAATGCAA TGGGTATATC AAAAGCCATG ATGGAAAAAG TCTTAGTAGC CAAATCAAAA ACTGTAGACC CGGCTAAAAC CCTTATCTGT TGCACACGAT ACGGAAACGT TATGGCATCC AGAGGTTCTG TAATCCCCCT ATTTATTGAT CAAGTAAAGA GTGGACAACC TTTAACGGTA ACAGATCCAA GTATGACCAG GTTTTTAATG AGCCTTGAAG AAGCAGTGGA ACTTGTAGTT TTTGCATTTC AAAATGCCCA AGCAGGTGAT ATTTTAGTGC AGAAATCACC GGCCTCCACC ATTGGTGACT TAGCTCAAGC AATTAAAGAG TTATTTAACG TGAATAACGA GATTAAAATA ATAGGTACTC GCCACGGAGA AAAGCTTTAT GAAACACTGC TTACCAAAGA GGAATATATA GTAGCTCAGG ATTTAGGTGG ATTTTTTAGA GTACCCGCTG ACAAAAGAGA TCTTAATTAT GATAAATATT TCGTAGAAGG AAACCAGAAG CTATCTTCAG AAGAAGAGTA TAACTCTCAT AATACATATA GGCTTAATAT AGAGCAGATT AAAGATAAAT TATTGTCCCT TGATTATGTA AATAACGAGT TAGAAAGCTG GAGTAAACCA TGA
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Protein sequence | MFKNSTLLIT GGTGSFGNAV LNRFLTTDIS EIRIFSRDEK KQDDMRKLYK NDKIKFYIGD VRDIASVKNA MHGVNYIFHA AALKQVPSCE FFPLEAVKTN VLGTDNVLTA AIEYGVKKVI CLSTDKAAYP INAMGISKAM MEKVLVAKSK TVDPAKTLIC CTRYGNVMAS RGSVIPLFID QVKSGQPLTV TDPSMTRFLM SLEEAVELVV FAFQNAQAGD ILVQKSPAST IGDLAQAIKE LFNVNNEIKI IGTRHGEKLY ETLLTKEEYI VAQDLGGFFR VPADKRDLNY DKYFVEGNQK LSSEEEYNSH NTYRLNIEQI KDKLLSLDYV NNELESWSKP
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