Gene Dred_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3027 
Symbol 
ID4956636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3286021 
End bp3287394 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content44% 
IMG OID640182216 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_001114355 
Protein GI134300859 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA TCTCAGTAGT CGGAACAGGC TACGTTGGAC TAGTAGCCGG AGTATGTTTC 
GCCGAAGTTG GCCATCAAGT CACCTGTGTC GATATCGATG AACAAAAAGT TAATATACTT
AAGCAAGGCA TCTCTCCTAT TTATGAAGCA GGGTTGGAGG AGTTAATGCA AAAGAATTAT
GCTGCTGGTA GGCTCAATTT CACCACAGAC TATATCCAAG CCTACAAAGA CGCAGACGCC
ATATTCATCG GTGTAGGTAC TCCTGAACAG CCGGACGGTT CCGCCAACCT TTCCTACATA
GCTACCGTGG CAAGGCAAAT AGCGGAAACC ATAGAAAAGG ATTGCCTGGT GGTGGTTAAA
TCAACAGTTC CTGTTGGTAC AAATGACAAA GTGGAGCAGT TTATAAATGA TTTCCTAATT
AATGATGTTA GGGTAGAAGT AGCTAGCAAC CCTGAATTTC TAGCCCAGGG CACAGCGGTA
CGCGATACTC TGGAGGCGGC GAGAATCATT ATCGGTACCG ACAGTAAATG GGCTGAAGAA
ATGCTCATGA AAATATATGA ACCATTTAAT CTACCAATTG TATCGGTTAG CAGGAGGTCG
GCGGAGATGA TCAAATATGC TGCCAACGAC TTCCTGGCAT TGAAAATATC ATACATGAAC
GACATCGCTA ATCTTTGTGA GCTGGTAGGC GCAGATATAC AGGACGTAGC ACGAGGAATG
TCATTCGATG AGCGTATTGG CAGTAAGTTC TTAAATGCCG GTATCGGCTA CGGTGGAAGC
TGCTTCCCCA AGGATACCAA GGCACTAGAT TATCTGGCTA GACAAAACGG CTATGAGCTG
AGGACGGTAA AGGCTGCTAT TACGGTGAAT GATGACCAGA AGACAATATT ATATAGGAAG
GCTTCGAACA GGTTGATTAC TTTTGATGGT CTGAAAGTGG CAGTGTTAGG GTTAACCTTT
AAGCCCGGAA CAGATGATTT GCGGGAAGCG CCGTCCCTTG AGAATATTCC GCTTTTGTTG
GAGCGAGGGG CACAAGTATA TGCTTATGAC CCCGTGGGTA GCGATAACTT TAGGCAGAAG
TTTCCGGAGA ATGAGTATAA AATTAAGTAT GTAAAGAAAC CGGAGGAGGC GCTTTCAGGT
GCTAATGTCT GCTTCATCTT CACCGAATGG GACGAGATTA AAGCAGTTAA GCCGGAAGTC
TATCAAAGTA TGATGCGTAC GCCGCTGGTA TATGACGGCA GAAATATATA TGAAATCCAA
GAGATGAAGG ATGCGGGAGT GGAGTATTAT TCTATTGGTA GACAGGCTGT GGAAAATAAA
AATATAAAGT TAAGTAATAC ACATAACACA ACCCACTGCC TATATAGCGC TTAA
 
Protein sequence
MYKISVVGTG YVGLVAGVCF AEVGHQVTCV DIDEQKVNIL KQGISPIYEA GLEELMQKNY 
AAGRLNFTTD YIQAYKDADA IFIGVGTPEQ PDGSANLSYI ATVARQIAET IEKDCLVVVK
STVPVGTNDK VEQFINDFLI NDVRVEVASN PEFLAQGTAV RDTLEAARII IGTDSKWAEE
MLMKIYEPFN LPIVSVSRRS AEMIKYAAND FLALKISYMN DIANLCELVG ADIQDVARGM
SFDERIGSKF LNAGIGYGGS CFPKDTKALD YLARQNGYEL RTVKAAITVN DDQKTILYRK
ASNRLITFDG LKVAVLGLTF KPGTDDLREA PSLENIPLLL ERGAQVYAYD PVGSDNFRQK
FPENEYKIKY VKKPEEALSG ANVCFIFTEW DEIKAVKPEV YQSMMRTPLV YDGRNIYEIQ
EMKDAGVEYY SIGRQAVENK NIKLSNTHNT THCLYSA