| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3010 |
|---|
| Symbol | |
|---|
| ID | 4956570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 3270903 |
|---|
| End bp | 3271883 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640182199 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001114338 |
|---|
| Protein GI | 134300842 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0413061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCTG ATATAATAAT GGAAACGGTA ACAAAAGCAG AGAAACGGGG TGACAGCTTG
ACCCAACAGA TGGAGATCAA CCGTACCAAC GATTATGCCT TTAAAAGAAT TATGGGATCA
GAAGAAGGTA AAGAAGCACT TATTGGTTTT CTAAATGCTG TGCTAAAACC TTTAAAGGGG
CAAGAACTAA CATCTGTGGA ACTGCTGGAT CGAGAGATTG ATCCAAAATA CTTATTGGAC
AGAGCTGCCC GGTTAGACAT ATTAGCCAGA ACTACAAACG GTATGTTAAT CAATATTGAA
GTCCAAATTA ACAATCGTTA CAACATTGAT AAGCGTACAC TCTTTTATTG GGCCGGTCTC
TACCACGGGC AATTAACCAG CGGACAGAAC TTTATCTACC TAAGAAAAAC CATTACCATT
AACATATTAG GATTTGACTG GTTCAGTGAC AGAAACAAAT ACCACCATAC CTTCCACATT
CGTGAAGATT CCACCGGAGA GTTGCTGATC GACGACCTGG AAATTCATTT TCTTGAATTA
CCCAAGATAA AAAGAATCAA GAGAAAGCCC CAAAATAATT TAGAAGAGTG GCTGATGTAT
TTCAACAACC TTCAGGGTGA AGAAATGGAG GAGATTGCCA TGACAAATCC GGGAATTCGC
AGAGCAATAA CCATAGAGCA AATCTTCTAT AAAAACCAGA AAGAACGTAG ACTTTACGAG
CTAAGAGAAA AGGCTGTTAG GGATGAAGTT TCTATGGTAG CAGGTGCGAG AGCTGAGGGG
TTAGCTGAAG GAGAGGCTAA AGGCCAAAGA GAGGCTATTT GTAAGTACCT GAGCGCCAGA
TTTTCCGACT TATCTCTTAA CCTTCAAGCC CAGGTGAGAA ATATCAACAA CCTATCTGCT
CTAGATAAAA TCATCAATCA AATATACACC GTTAACAGCC TGGAAGAAGC CGAGGCTATT
GTGCAAGAAG CAATGAATTA A
|
|---|
| Protein sequence | MHPDIIMETV TKAEKRGDSL TQQMEINRTN DYAFKRIMGS EEGKEALIGF LNAVLKPLKG
QELTSVELLD REIDPKYLLD RAARLDILAR TTNGMLINIE VQINNRYNID KRTLFYWAGL
YHGQLTSGQN FIYLRKTITI NILGFDWFSD RNKYHHTFHI REDSTGELLI DDLEIHFLEL
PKIKRIKRKP QNNLEEWLMY FNNLQGEEME EIAMTNPGIR RAITIEQIFY KNQKERRLYE
LREKAVRDEV SMVAGARAEG LAEGEAKGQR EAICKYLSAR FSDLSLNLQA QVRNINNLSA
LDKIINQIYT VNSLEEAEAI VQEAMN
|
|---|
| |