Gene Dred_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2998 
Symbol 
ID4956529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3258718 
End bp3261498 
Gene Length2781 bp 
Protein Length926 aa 
Translation table11 
GC content44% 
IMG OID640182187 
ProductS-layer domain-containing protein 
Protein accessionYP_001114326 
Protein GI134300830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGAAA GAAAGTATCT AGCAATATTG CTTAGTCTGT GTTTAGTTTT ATCCTTAACC 
ACAGTAGCCT TTGCTGCCAC ATTTACAGAT TTACAAGGCC ATTGGGCAGA GGGGCAAATT
AATGAATGGT CCGCCAAGGG GCTTGCTGGG GGATACGCAG ACGGTACCTT TAAGCCCAAC
AATGAAGTTT CCAGGGCAGA ATTTGTTGCT CTGGTAAACC GGGCCTTTGC ACTAAACAAT
GGTGGTGCAG CAAATAGTTT TACAGATGTT AAAGAAGGTC AATGGTATTA TGGCGAGGTA
GCCGTTGCCA AAGCTGCCGG TTATATTGGT GGGTACAGTG ATGGTACCTT CCGGCCCAAT
CAGGCCATAT CCCGGCAAGA GGCTGCTAAT ATCCTGACTA GATTGTTAAA GCTTCAAACA
ACCACAGCAG GTATTGATGC CTTTGCAGAT GCTTCCCAAA TACAAGCCTG GGCCCAGGGT
GGCATAGGTG CAGTGGTTAA TAGCGGTTTG ATGCATGGAT TCCCGGATAA CACCTTCCGT
CCGCTGAAGA GCATTACCCG AGCTGAAGCA GTTGTATCTT TGGATCGGGC TTTAAAGGCC
AATGGAAAAG AGGTAACCGT TCAGAGTGGT ATTGAGGGTA AAGTTACTCT GAATGGCAAA
GCCATAGCCA ATGCTGTTGT GAGAGTATTT CAGGCTGATA GCTTCAAGGT AATGGAAGAA
GCCAAGACAG ATAGCAACGG TAATTATAAA TTCAACCTAC CCAAGGGCAA GTATGACCTC
ACTGCTTCTA CTGACAGTGA AGTAGGCTAC AAAAGTGATG TCAAGGTAGC GGATAACCAG
TTAACCTCAC AGGCTTTGAC CTTGGAAAAG GCAGCCATAT TGAGCGGTGA CCTGGAGGAC
AAAGATAAAA GAACAGTTAA AAATGCCACC ATTGCATTTA CCACCAACCC TACCTTTGTT
ACCACCACAG ATAAGGATGG TAAGTTTAAG GTAGCTGTGC TGGCCAATCG TGATTATACC
GTAAGGGCCT ACAACCCTGA TGAAAAGGAC AAGGCACCGG ATGTTGTAAT TGAAGGACTA
AAAGTTGCTG CGGCAGGAAA GCAACAGCTT GCTACTCTAA AAGCCCACTT TGCCGTTAAA
AGTAGTAGCG GCGGCGGTGG TGGTGGCGGT GGATCAAGCA CTCCTGCTAT TGATGTAATT
AATCAACCTG GTACCCATAC TGGTAATTAT ACGATCACTA CCAGCGGTAC CTATGGTCCT
GCTAGCGGAA CATCAACCAT CGTGGGTTCC TTAACCATCA ACCCTGGGGC AAGTGGCGAA
GTTACCATCC AGAACATAGA TGTTGACAAC GTAACAGTAA GTTCTGGGGC ATCTAATTCA
ATAAAATTTA AGAAAGTAAA AGTTAAGCAA AAATTAACTG TTAACACCGG TAATCAAGCT
AATAGTGTTC GTATTGTCAC AGAGGATTCG TCGATTACCG TTACCAAGGT AGAGTCTAAA
GTTATTCTGG AAGCAGCTCA GGGAGGTTCC TTTGGTGATG TTGCCGTAGA AGCAGCTGCT
GCTGGTCAGC AAATTGAACT TAGAGGAACT TTTAACGGAA CTGTAACTGT GGCTCAGGGA
GTGCAGGGTT TGACACTAAA TTTGGGGTCA GGAACAACCT TGGCAAACCT GGCAGGCAAT
GTTTCAGGAA TTTCCAATGT GGTAGTGGCA GATGATGCAA CCCTTCCTCC CGCTCTAAAT
GAAATAGCTG CCGACTTGGA TACTGTACGA AATGTTAAAG CTAACTTAAA TATAACTTTT
GCCAATGGCG ACACTGTGAC AAATGTGACA CAGAATGTTA CTTTACCAAC GGTAAATGCT
GATCCCAATG TCACTATAAC ATGGGCCTCA AGTAATACCG ATGTAATCAC CAATGACGGT
ACTGTAAAAC GGCCCAGAGT GGGTGGAGAT AAAACAGTTA TATTAACTGC TACCATTAAG
AAAGGGAAAG CAACCGTAAT AAAAACCTTT ACTGTAACGG TAAAAGGCGT CAATCTTGTG
CCGGCAGAAC CAACTCTGGA AGCATTACTA ACTGCTATTC AAACGGGCCT TAATAGTCTT
ACCCAAGACG AATGGAATAA CCTGAAGGCA CAAAGGGATC AACTGGTTAA TAACCTAACA
GAAGAAGAGA TTTTTGAAGC CTTAAGAAAG TCTGGCTTCG AAAATATAAC CAACACGAAT
ATTACCATTG AAGAAGCACG CTTTGCCTTA GCAACCATCC GCGGGTTGGC TCACCTGGGA
CGGGATAATG TAGGCGATAG TGTTCAGTTG ATCAGCGGAG AGATTGAGAA GCTGAAAACG
GAGTTTAGTG AAGTTGTTAC TAAGCTTCGG CAATATAACA TTAATCAAGA GGTTGTATAT
AAATATGGCA TAGATTTATA TACCTGCATC TTGCAGGGCG ATTGCAAGGT TACTGCCGAT
AACTATGAAA AAGACCTTTA CAATGCTGCA CTATACGTAT TGCGTGATCG CCAACACCCA
GAGTTAAAAA CAGTGGCTAA ATTAACCTTT GATCGCCTAA AAACATATCA CTCTCAGGAT
TCTGCCTTAA GTGGAATTCT TAAAGGAATT GTCTTTGAGA AAGATGAAAA CTCACAGCCC
GGAGATGTTG AAGTAGATGC CACTGTAATA ATGTTGGCAA AGAAAGAGTT AGAGAGCAGG
AACGATAGTG CCTATGACAG CCTCATAGAA ACTTTAGACT TCATGGTCAA CCTAAGTAAG
ACCTTTATGC CACTAAATTA A
 
Protein sequence
MKERKYLAIL LSLCLVLSLT TVAFAATFTD LQGHWAEGQI NEWSAKGLAG GYADGTFKPN 
NEVSRAEFVA LVNRAFALNN GGAANSFTDV KEGQWYYGEV AVAKAAGYIG GYSDGTFRPN
QAISRQEAAN ILTRLLKLQT TTAGIDAFAD ASQIQAWAQG GIGAVVNSGL MHGFPDNTFR
PLKSITRAEA VVSLDRALKA NGKEVTVQSG IEGKVTLNGK AIANAVVRVF QADSFKVMEE
AKTDSNGNYK FNLPKGKYDL TASTDSEVGY KSDVKVADNQ LTSQALTLEK AAILSGDLED
KDKRTVKNAT IAFTTNPTFV TTTDKDGKFK VAVLANRDYT VRAYNPDEKD KAPDVVIEGL
KVAAAGKQQL ATLKAHFAVK SSSGGGGGGG GSSTPAIDVI NQPGTHTGNY TITTSGTYGP
ASGTSTIVGS LTINPGASGE VTIQNIDVDN VTVSSGASNS IKFKKVKVKQ KLTVNTGNQA
NSVRIVTEDS SITVTKVESK VILEAAQGGS FGDVAVEAAA AGQQIELRGT FNGTVTVAQG
VQGLTLNLGS GTTLANLAGN VSGISNVVVA DDATLPPALN EIAADLDTVR NVKANLNITF
ANGDTVTNVT QNVTLPTVNA DPNVTITWAS SNTDVITNDG TVKRPRVGGD KTVILTATIK
KGKATVIKTF TVTVKGVNLV PAEPTLEALL TAIQTGLNSL TQDEWNNLKA QRDQLVNNLT
EEEIFEALRK SGFENITNTN ITIEEARFAL ATIRGLAHLG RDNVGDSVQL ISGEIEKLKT
EFSEVVTKLR QYNINQEVVY KYGIDLYTCI LQGDCKVTAD NYEKDLYNAA LYVLRDRQHP
ELKTVAKLTF DRLKTYHSQD SALSGILKGI VFEKDENSQP GDVEVDATVI MLAKKELESR
NDSAYDSLIE TLDFMVNLSK TFMPLN