| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2992 |
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| Symbol | |
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| ID | 4956493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3251812 |
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| End bp | 3253224 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640182181 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001114320 |
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| Protein GI | 134300824 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTCG GACTTAATTT AGAGCAGACC CAAAAACTTA TTATGACACC TGAGCTTCGT
CAGGCCATCA CGGTATTGCA GTTATCTTCC CTGGAGTTGG TGGAATACGT AGAACAACAG
GTGTTGGAAA ACCCTATGTT GGAAGTTAAG GAGTACGACC AGGAGCGTCA GGAGGACCCA
AATACCACCC GAGAAGCCCA TTCAGAGAAA ATAGATAAGA AAGAATTTGA CATGGACTGG
GAAGAGTATT TTCAAGACCG CAGCGACCTG GGGTTTTCCC CGGGCAGAAA TCAGAGGGAG
ACTACTGAAC AACCTAGTTT TGAGCAGTTT GTGACCCATA CACCCACCCT AATCGAACAC
CTAACCTTTC AACTGAGCCT CAGCCGGGCC GATGAAGATT TAAAAAGAAT TGTTCAATAT
TTCATTGGTA ATATTGACCC CAGGGGTTAT CTGGGTATTG GTCTGGAAGA AGCAGGGCAA
CAGCTGGCAG TGGGGTTGGA TCAGTTGGAA AGGGCCCTGC GGATTTTGCA AGGTTTTGAC
CCCCACGGTG TAGGGGCCAG GGATTTAAAA GAATGCCTAA GAATTCAGTT GGAGTTTTTA
AAAATTGATG ATCCCCTGGT AAATGCATTG ATCGATCAAT ATTTACCAGA TCTGGCCACA
GGAAAAGTGG CTAAGATTGC CGCCAAATTA AATGTATCTC CCCAGGAAAT TCAACGGGCA
GCCGATATTA TTAAAAAGCT GGAACCAAAG CCCGGTAGAA ATTTCAGCCA AAACGATGAC
TTGCGCTATA TCACCCCGGA TGTGGTGGTG GAAAAGGTAG AGGGAAAGTA TGTTATTTTG
GTTAATGATG TGGCTATTCC ACGTCTTTCC ATTAACAATA CCTACCGCAG GGTTTTAGCG
AAAAATAGTT CTGCCGATCA GAATACGAAA CAGTTTGTGG AGGAAAAGCT AAATGCAGCG
GCCTGGTTAA TACGCAGCAT TGAACAGCGT CGGTTAACGT TGTACAAAGT GGCCAATTGC
CTGGTGGAAT TGCAACATGA CTTTCTGGAT TACGGGGTAA AATTTTTGAA GCCCCTAAAC
CTGAAAAAAG TTGCCGAGAT TGTTGGCGTT CACGAGTCCA CCGTTAGTCG GGCCACCTCT
AATAAGTACA TACAAACCCC CCAGGGTGTC TTTGAAATGA GGTATTTCTT TTCCTCGGGA
CTTGATGATG CCAGTGGCTC CCAGGTATCT GCGGAGAGTC TAAAAAAGAT TTTGCAGGAG
ATTATTCAAC AAGAGGATAC TTCCAGTCCC CTCAGTGATC AAAAGATTGC TGAATTGTTT
GCTAAACGAG GGGTTAAGAT ATCTCGTAGG ACAGTTACAA AATACCGCGA TGAATTAGGT
ATCCCTGCCA CAACCAGGAG AAAAAGATAT TAA
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| Protein sequence | MDFGLNLEQT QKLIMTPELR QAITVLQLSS LELVEYVEQQ VLENPMLEVK EYDQERQEDP
NTTREAHSEK IDKKEFDMDW EEYFQDRSDL GFSPGRNQRE TTEQPSFEQF VTHTPTLIEH
LTFQLSLSRA DEDLKRIVQY FIGNIDPRGY LGIGLEEAGQ QLAVGLDQLE RALRILQGFD
PHGVGARDLK ECLRIQLEFL KIDDPLVNAL IDQYLPDLAT GKVAKIAAKL NVSPQEIQRA
ADIIKKLEPK PGRNFSQNDD LRYITPDVVV EKVEGKYVIL VNDVAIPRLS INNTYRRVLA
KNSSADQNTK QFVEEKLNAA AWLIRSIEQR RLTLYKVANC LVELQHDFLD YGVKFLKPLN
LKKVAEIVGV HESTVSRATS NKYIQTPQGV FEMRYFFSSG LDDASGSQVS AESLKKILQE
IIQQEDTSSP LSDQKIAELF AKRGVKISRR TVTKYRDELG IPATTRRKRY
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