| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2984 |
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| Symbol | smpB |
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| ID | 4956483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3242267 |
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| End bp | 3242752 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640182173 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001114312 |
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| Protein GI | 134300816 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000114855 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGCCA AAGCAACCTC CGAAAAAGGT TTTAAAACTA TTACCGACAA CCGCCGAGCC
CGGCATGAGT ATCACGTCAT CGAAACCTAT GAAGCTGGTA TTGCTTTATC AGGTACAGAG
GTGAAATCAC TTCGGGCGGG AAAGGCCAAT TTGCAGGATG CCTTTGCCCG AGTTGAAAAC
GGCGAGATGA TGCTTTATAA TTTACACATC AGCCCCTATG AACAGGGCAA TCGTTTTAAC
CACGAACCCA AAAGAACCCG TAGACTACTA ATGCATAAAC AAGAAATTTT GCGTCTCTAT
GGTAAGGTTC GTGAAAAGGG ACTTGCATTA ATTCCGCTGA AGGTGTACTT TAACCCTAGG
GGTAAAGTAA AAGTTCAGCT AGCCTTGGCC CAAGGTAAAA AATCCTATGA TAAACGTCAT
GATATTGCCG CAAGGGATGC CAAGCGTGAT ATGGACCGCG CCATGCGGGA GCGGCAGAAG
ATGTAA
|
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| Protein sequence | MAAKATSEKG FKTITDNRRA RHEYHVIETY EAGIALSGTE VKSLRAGKAN LQDAFARVEN
GEMMLYNLHI SPYEQGNRFN HEPKRTRRLL MHKQEILRLY GKVREKGLAL IPLKVYFNPR
GKVKVQLALA QGKKSYDKRH DIAARDAKRD MDRAMRERQK M
|
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