| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2958 |
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| Symbol | |
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| ID | 4956387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3212338 |
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| End bp | 3214044 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640182146 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_001114286 |
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| Protein GI | 134300790 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.177996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGC GCATGGGCTT TATTGTGGCC ATTGCTTTTT TATTTACCCG CTGGCAAGGG
TTTCGATCCC TGTTAGAGAA TAGGCCCACG CTGAAGGGAA AACTATATCT AGGGGTTATT
TTTGGCATCT TTGGTATCAT TGGAACTTAT ACTGGCATCA CCGTAACACC CAGGGAGGTG
CAAAACCTTT TTCCTGGCAC CCTAGCCTAT GAAGATGCCA TTGCCAATTC CCGGGCCATC
GGAGTTATGG TGGGTGGCTT ATTGGGTGGT CCGTTGACGG GTTTACTGGC GGGGTTAATT
GCCGGCGTTC ACAGAATGTC CATGGGAGGA TTTACGGATA TGGCCTGTGG AATTTCCACG
GTCTATGAAG GGCTCCTGGC AGGGGTTATT TACTATAAAA TGAAACAAAA AACCCTAACT
CCCGGCGTGG CGTTAATGAC GGGTCTGGCC GGGGAAATCG GTCAAATGGC CATTATCCTC
ATGGTGGCCC AGCCCTTTTA CAAAGCGCTG GCCCTGGTCA AAATTATTGC CATGCCCATG
ATTTTAGCGA ACAGTTTAGG AATTGCCTTA TTTATAGCCA TTGTTCAGAC TGTTGTAGAA
AACGAAAGAA CCATTGGCGC CATTCAGGCC CAACGGGCGC TGGCCATTGC GGATAAAACC
CTTGCTCACC TGAGAAAGGG GTTAAACCAT GAATCAGCCC TGGCGACGGC ACAAATTATA
TATGAAGAGT CCTGTGCCGG TGCAGTGGCA ATTACAAACC AGGAAATGAT CCTTGCCCAT
GTGGGGGAAG GGTCTGACCA TCATCATCCT GGCGCACCGA TTTTAACCAA AGTAACAAGG
GAAGTTTTAC AACATGGCCA ACTTGCCATT GCTGCCAGCC CCCAGGAGAT TTTATGCACC
AATGTTCATT GTGCACTGCA ATCGGCGGTG GTGGTGCCCC TTTACAATGG AAAAGGGATT
GTGGGGACCC TTAAGCTTTA CTCTGTGCGG CGGCAGCAAC TGGACCGACT GATGGTGGAG
TTGGCCCGGG GATTAGCACA GCTATTTTCC ACCCAACTGG AGCTGGGGGA AGCAGAGAAG
CAGGCCAGGT TGGTCCAGGA TGCGGAGATT AAGGCTTTGC AGGCTCAAAT AAATCCCCAC
TTTCTTTTTA ATGCTTTAAA TACTGTGGTG TCTTTAATTA GAACCAAACC AGATGAAGCA
AGAAGTGTCC TCATTCACCT GGGTACCTAT ATCCGGCAAA ATTTAAAGAG CTCCTTGAAT
AAGTGGACTA ACTTGGAAAC GGAGCTAAAA CATGTGGAGG CTTATTTAGC CGTTGTACAA
GCTCGTTTTT CCCATCGACT AAGGGTTGAA ATGAATATTC CACTTACTTT ACACGGAGTG
GTTATACCAC CCTTAACCCT GCAGCCTCTG GTGGAGAATG CGGTTCAACA TGGCTTCCCC
AGAATCACCG AAAACTCCAG CATAATCATA GAGGCGGTAC AGCAGGAGAA ACAAGTGCGA
ATCTCGGTAA CGGATAACGG TGTAGGCATA GAGAGGGACC GGGTGGAAGA ACTGCTAAAG
GCAGAAAAGA GAAGTGATGG GGGGATTGGT TTAATTAATG TCCATAGCAG GCTCATTAGT
ATATTTGGGC CCCAGGCCGG TCTTTCCATT CATAGTGAAC CCGGTGCAGG TACCAGAGTT
GAATTTTCAA TTCCGATTGC TCAGTGA
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| Protein sequence | MAQRMGFIVA IAFLFTRWQG FRSLLENRPT LKGKLYLGVI FGIFGIIGTY TGITVTPREV
QNLFPGTLAY EDAIANSRAI GVMVGGLLGG PLTGLLAGLI AGVHRMSMGG FTDMACGIST
VYEGLLAGVI YYKMKQKTLT PGVALMTGLA GEIGQMAIIL MVAQPFYKAL ALVKIIAMPM
ILANSLGIAL FIAIVQTVVE NERTIGAIQA QRALAIADKT LAHLRKGLNH ESALATAQII
YEESCAGAVA ITNQEMILAH VGEGSDHHHP GAPILTKVTR EVLQHGQLAI AASPQEILCT
NVHCALQSAV VVPLYNGKGI VGTLKLYSVR RQQLDRLMVE LARGLAQLFS TQLELGEAEK
QARLVQDAEI KALQAQINPH FLFNALNTVV SLIRTKPDEA RSVLIHLGTY IRQNLKSSLN
KWTNLETELK HVEAYLAVVQ ARFSHRLRVE MNIPLTLHGV VIPPLTLQPL VENAVQHGFP
RITENSSIII EAVQQEKQVR ISVTDNGVGI ERDRVEELLK AEKRSDGGIG LINVHSRLIS
IFGPQAGLSI HSEPGAGTRV EFSIPIAQ
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