Gene Dred_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2955 
Symbol 
ID4956379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3208492 
End bp3209916 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content50% 
IMG OID640182143 
Productmalate dehydrogenase 
Protein accessionYP_001114283 
Protein GI134300787 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000459536 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAT CATTGAACAT TACCCTTCAA CTCCGGCTGG CCAATAAACC CGGTACCTTG 
GCAAAGGTAC TAGATGCCAT TGCCCTGGAA GGGGGCAGCT TGGGAGCCAT CGACCTAGTC
TCTGCCACTC CGTCCTTTAT TACCAGGGAC CTAATGGTTC GTCTTAAAGA AAAAGGACAT
CTTAACGACT TGATTCAGAC TCTGAAAAGA ATTCCAGATG TACAGGTAAC CCATGTGGCA
GACAGAGTTA TTACCAGACA CATGGGTGGT AAAATTGAAG TGGTCCCTAA AAGACCTGTG
CAAAATTGGG AAGATTTAGC CATTGTTTAC ACACCGGGGG TTGCTGTGGT TTCCGAAACC
CTGGCCCAGA AACCGGATAT GGCCTATAAA CTAACCATGA AGGGTAATAC CGTAGCCATT
GTCACAGACG GGTCAGCGGT ATTAGGCTTA GGAAACTTGG GACCAACCGG TGCTCTGCCG
GTTATGGAAG GAAAAGCGGT GCTTTTCAAA CAATTTGGCG GGGTGGATGC CGTTCCCATC
TGCCTGGATG TACATGAACC CCAACAAATC ATAGACACTG TGGCGGCCCT GGCCCCTGCC
TTTGGAGGCA TCAACCTGGA GGACATTGCT GCCCCCAAGT GTTTTGAAAT TGAGGAAAAA
CTAAAGCAGC TACTGGATAT TCCCGTGTTT CATGATGATC AGCACGGCAC GGCCATTGTC
ACCGTGGCGG GGTTAATCAA CGCTCTAAAA GTCGTCGATA AGGACATCCA TAGTATCAAG
CTGGTCATGA GCGGTGCAGG GGCAGCGGGA GTGGCCATTG CCAATATCTT AATAAGCGCT
GGAGTCCGTA ACCTTATTGT GTGCGACCGA AAGGGTGCCA TCTCCCGTCA CAATATGCCC
TCGGAACCCT CCAAGCAATG GCTTGCGGAA AACACCAACC CAGAGAACAT TCAGGGAAGC
CTTAAAGAGG TTATAGCCGG TGCCGATGCC TTTGTGGGGG TTTCCGCTCC CGGAGTATTA
AACCGTGCAG ACATCCAGAA AATGTCCCCA AAACCGGTGG TCTTTGCCTT GGCCAACCCG
GAACCAGAGA TTCCACCGGA GGAAATTTAT GATATTGCCG GGGTTATTGC CACGGGACGT
TCTGACTACC CCAACCAGAT CAACAATGCC CTGGCTTTCC CCGGCATTTT CCGAGGAGCC
CTAAACTGCC ATGCTACGAC CATTAATGAT GAAATGTGCT TGGCCGCTGC CTATGCACTG
GCTGGTATTA TTGAGGAGGA CCAGCTTACC GCAGAACACA TCATACCCTC TGTATTTAAT
GAAAAAGTGG CTCCGGCTGT GTCCAAAGCA GTGGAAGATG TTGCAAGAAA AACCGGGGTG
TCCCGCAAGG GACTGCATAA TGGAATAAAT GGTCATAACT TTTAA
 
Protein sequence
MITSLNITLQ LRLANKPGTL AKVLDAIALE GGSLGAIDLV SATPSFITRD LMVRLKEKGH 
LNDLIQTLKR IPDVQVTHVA DRVITRHMGG KIEVVPKRPV QNWEDLAIVY TPGVAVVSET
LAQKPDMAYK LTMKGNTVAI VTDGSAVLGL GNLGPTGALP VMEGKAVLFK QFGGVDAVPI
CLDVHEPQQI IDTVAALAPA FGGINLEDIA APKCFEIEEK LKQLLDIPVF HDDQHGTAIV
TVAGLINALK VVDKDIHSIK LVMSGAGAAG VAIANILISA GVRNLIVCDR KGAISRHNMP
SEPSKQWLAE NTNPENIQGS LKEVIAGADA FVGVSAPGVL NRADIQKMSP KPVVFALANP
EPEIPPEEIY DIAGVIATGR SDYPNQINNA LAFPGIFRGA LNCHATTIND EMCLAAAYAL
AGIIEEDQLT AEHIIPSVFN EKVAPAVSKA VEDVARKTGV SRKGLHNGIN GHNF