Gene Dred_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2942 
Symbol 
ID4956212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3185992 
End bp3187185 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content39% 
IMG OID640182127 
Productmetallo-beta-lactamase/flavodoxin domain-containing protein 
Protein accessionYP_001114270 
Protein GI134300774 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0065497 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAA TCAAAGATAA AATATTCTGG GTTGGCTATA AGGACTGGGA TTTAAAGAAA 
TTTCATGGGG AGGAGTATTC CACCCATAGA GGCTCATCGT ATAACTCCTA TTTGATTAAT
GACGAGAAGT TAGTGCTTAT CGATACTGTA TGGACCCCTT ACCATGAAGG CTTTGTGGAA
GAACTGGATC AAAAATTTGG AATTGATAAA ATCAATCTCA TTGTAATCAA TCATTGTGAA
GTGGACCATG CCGGGAGTCT GTCTTATTTA TTGGAGAAAA AACCGGATAT TCCGGTTTAC
TGTACAAAAA AGGGTTCGGA AATGATAAAG AAGCATTTCC ACAAGGATTG GCATTTTAAC
GTGGTTAAAA CTGGAGATAG TATTGAAATA GGGCAGTACA AGCTTATTTT TATAGAAGCT
CCAATGCTTC ATTGGCCCGA TACAATGATG ACTTATGTTC AGGGGGCGAA TCTTTTAATA
TCTAATGATC CCTTTGGTCA GCATTATGTA TCCCCCCATT ATTTTAATGA TCAAGTGGAT
CAGGGTGAAT TATACTATGA AGCACTAAAA TACTATGCCA ATATCATTAC ACCCTTTAAC
AAGCTGGTAA AGAACAAAAT TAAGGAATTA AAGTCCTTAA ACCTGCCTAT TGACATGATT
GCCCCCAGCC ATGGCGTTAT CTGGCGGGAT AATCCCATGC AAATCGTAGA GAAATATGAA
CAATGGTGCA GTAACTATCA CGAAGGCACT GTTACCATCT TATATGACAC CATGTGGGGT
GCCACTAAAA AGATGGCTTT GGCAATGGCC CGGGGCTTAG AAAATAAAGG GGTTCCTGCA
AAGGTAATTA ATACTGCCAA GTTTGATAAG AATGATATTG TTACAGAGGT CTTTCGGTCA
AAGGGAATTA TCGTAGGCAG TTCAACCATT AATAATGGGA TACTGTCTTC CATGGCGGCT
ACTCTAGAAA TTATCAAGGG TTTAAAATTT AAGGAGAAAG TGGCTGCGGC CTTTGGTTCA
TATGGCTGGA GTGGGGAGTC AGTAAAGATA ATTGAGGAGT GGCTCAGGGA AAGTGGCTTT
AAGATTATTC AGGAAGGCAA AAAGGTCAAC TGGGATCCCA CCGGGGATGA ATTAAATGAA
TGTATTGCCT TTGGAGAGGT CTTTGCTGAA CAGATTAAAT CCTACGTCAT GTAA
 
Protein sequence
MFQIKDKIFW VGYKDWDLKK FHGEEYSTHR GSSYNSYLIN DEKLVLIDTV WTPYHEGFVE 
ELDQKFGIDK INLIVINHCE VDHAGSLSYL LEKKPDIPVY CTKKGSEMIK KHFHKDWHFN
VVKTGDSIEI GQYKLIFIEA PMLHWPDTMM TYVQGANLLI SNDPFGQHYV SPHYFNDQVD
QGELYYEALK YYANIITPFN KLVKNKIKEL KSLNLPIDMI APSHGVIWRD NPMQIVEKYE
QWCSNYHEGT VTILYDTMWG ATKKMALAMA RGLENKGVPA KVINTAKFDK NDIVTEVFRS
KGIIVGSSTI NNGILSSMAA TLEIIKGLKF KEKVAAAFGS YGWSGESVKI IEEWLRESGF
KIIQEGKKVN WDPTGDELNE CIAFGEVFAE QIKSYVM