Gene Dred_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2939 
Symbol 
ID4956133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3182797 
End bp3183969 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content46% 
IMG OID640182124 
Productputative RNA methylase 
Protein accessionYP_001114267 
Protein GI134300771 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000322588 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA AAATTGAGTT AATTGCTACA GCCACCTTTG GCCTAGAGTC GGTGGTAGCT 
CACGAAGTAA AGAAAATGGG ATATGACGTG ATGGTGGAAA ATGGCAGAGT AACCTTTTTC
GGTGATGAGA TGGCCATCTG CCGCACCAAC CTTTGGCTGC GTTCCGCGGA CCGAGTTCTT
ATAAAAATGG GGGAATTTAA AGCCACTTCC TTTGAAGAGC TATTCCAACA AACCAAGGCC
CTACCCTGGC CCGATTGGTT ACCCGTGGAC GCCACCTTCC CGGTGGAGGG CAAGTCAATA
AAATCTAAGT TGCACAGTGT TCCCGATTGC CAGGCCATCG TAAAAAAGGC CATTGTAGAA
AAGATGAAAC AAACTTATAA AAAGGAATGG TTTGAGGAAA CAGGTCCCCG TTATACCATT
GAAGTAGCTT TACTGAAAGA CATTGCCACC ATCACCATTG ATACCAGCGG CGTAGGGTTG
CACAAAAGAG GGTATCGGAA ACTGGCCGCC CAGGCACCCT TAAAGGAAAC CCTGGCCGCT
GGCTTACTGT CCATTGCCCG TTGGTACCCC GACCGCCCGT TATTAGATCC CTTTTGCGGT
TCCGGCACTA TTCCCATTGA AGCAGCACTT ATTGGACACA ATATTGCACC GGGTATCGGT
CGGAACTTTG TTGCTGAAGA ATGGCCCGTT ATTCCCAAGA AATTATGGCG AAACGCTCGA
AAAGAAGCTT TGGAATCCGA GATTCACGAT AATAAACTAC GTATCTACGG TACAGACATC
GATGATAAAG TTTTAAGTTT AGCCCGCTAC CATGCCAAAC AGGCCAATGT AGAAGATTCC
ATTCATTTTC AGAGGGTTCC AGTGGCTAAT GTTCGAACGA AGCAAAAGTA CGGCTTTATT
ATTACTAACC CGCCCTATGG TCAGAGGTTA GGCGAAATAC AACAGGTTAA GAAACTTTAT
GAGGAATTGG GACAAACCTA CAAAACACTG GATAATTGGT CTTGCTTTGT CATTTCTTCC
TTTGAGCATT TTGAACAATA CTTTGGTAAA AAAGCTGATA AGAAGCGTAA GCTTTACAAT
GGCCGGGTGG AATGCAATTA TTACCAGTAC CCAGGCCCCC GACCGCTCCG TCCTAAGAAG
GTAGAAGATT CGATTGCTGT ATCACAAGAT TAG
 
Protein sequence
MAKKIELIAT ATFGLESVVA HEVKKMGYDV MVENGRVTFF GDEMAICRTN LWLRSADRVL 
IKMGEFKATS FEELFQQTKA LPWPDWLPVD ATFPVEGKSI KSKLHSVPDC QAIVKKAIVE
KMKQTYKKEW FEETGPRYTI EVALLKDIAT ITIDTSGVGL HKRGYRKLAA QAPLKETLAA
GLLSIARWYP DRPLLDPFCG SGTIPIEAAL IGHNIAPGIG RNFVAEEWPV IPKKLWRNAR
KEALESEIHD NKLRIYGTDI DDKVLSLARY HAKQANVEDS IHFQRVPVAN VRTKQKYGFI
ITNPPYGQRL GEIQQVKKLY EELGQTYKTL DNWSCFVISS FEHFEQYFGK KADKKRKLYN
GRVECNYYQY PGPRPLRPKK VEDSIAVSQD