Gene Dred_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2933 
Symbol 
ID4955454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3176134 
End bp3177204 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content44% 
IMG OID640182118 
Productinner-membrane translocator 
Protein accessionYP_001114261 
Protein GI134300765 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGAG AGAGAATGAA ACCCGTACTA ACCCTAGGAC TCATTTTATT ATGCAGTATT 
GCACTATATT TTGGTCAAAA CTATTTAGAT AGTTTTAAAA TAAGAGTTTT AAATCTGGCC
GCTATTTTTG TTATCCTAGG TGTCAGCATG AACCTGGTAC TTGGATTTAC CGGGATGTTT
TCGCTGGGAC ATGCGGGCTT TATGTGTGTA GGAGCGTATG TTTCCGCTAT TTTAACCATG
TCACCGGAAA GTAAAGAAAT GATTTATTTT ATGGAACCCA TTATCTCTCC TCTGGATAAA
ATTCACTGGC CAGTGTTTCC GGCAATCATC ATGGCGGGTA TTGTAGCTGC ATTCTTTGGC
TTTTTGATTG GTTTTCCGGC TCTAAGGCTG CGTGATGACT ATCTGGCCAT CGCCACATTG
GGGTTTGGTG AGATTATCCG AATTATCGTT ACCAACACCA TCACCATTAC CAACGGTTCA
CTGGGGCTCA AGAATATCCC ATCGATTAAA AGTCTTTGGG TGTATTGGGG TTTTGCCATA
GCTACCATTT GGATTTTAAA ACGGCTTATT AACAGCAGTT GGGGTTATGC CTTTAAGGCA
ATTCGGGATA ACGAAATTGC TGCGGAGGCC ATGGGTATTG ATATCTTCAA GCATAAATTA
TTATCCTTTT CCGTCGGTGC TTTCTTTGCA GGTGTAGCAG GGGCTTTGAT GGGGCACCTT
ATTACCTCTG TGGACCCGAC TATGTTTCGG TTCTTATTTA CATTCCAGAT CCTGCTTATT
ATTGTATTGG GTGGCCTAGG GAGTCTAACT GGATCGGTTA TTGCAGGGGT TGTTGTTACC
ATTATGATGG AAGTTCTGCG GTTTGTGGAG CAGCCCATGA ATTTTCTTGG GTTGGCCATC
CCTGGCATAC CTGGTATGCG GATGGTTATT TTCTCCCTTC TATTGCTACT GGTTATCCTA
TACTATCGTC AGGGCCTAAT GGGGACCAGG GAGTTTAACT GGGATTGGGT TCTGGATAAA
ATGGGTGTCA GCCGCAGCAG CAAAGAAAGG AGAGTAGGGG CAGATGGCTA A
 
Protein sequence
MDRERMKPVL TLGLILLCSI ALYFGQNYLD SFKIRVLNLA AIFVILGVSM NLVLGFTGMF 
SLGHAGFMCV GAYVSAILTM SPESKEMIYF MEPIISPLDK IHWPVFPAII MAGIVAAFFG
FLIGFPALRL RDDYLAIATL GFGEIIRIIV TNTITITNGS LGLKNIPSIK SLWVYWGFAI
ATIWILKRLI NSSWGYAFKA IRDNEIAAEA MGIDIFKHKL LSFSVGAFFA GVAGALMGHL
ITSVDPTMFR FLFTFQILLI IVLGGLGSLT GSVIAGVVVT IMMEVLRFVE QPMNFLGLAI
PGIPGMRMVI FSLLLLLVIL YYRQGLMGTR EFNWDWVLDK MGVSRSSKER RVGADG