Gene Dred_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2931 
Symbol 
ID4956202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3174650 
End bp3175363 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID640182116 
ProductABC transporter related 
Protein accessionYP_001114259 
Protein GI134300763 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGC TTAAAATTGA AGACTTGCAT GTATATTACG GTGGTATCCA TGCCCTAAAG 
GGCATCACTC TGGAGGTACC GGAAAATAAG ATTGTTACCC TAGTTGGTGC TAATGGTGCT
GGCAAGAGTA CCACCCTGCG TGCCATTAGT AGCCTAGTCC CCATTGCCCA GGGGAAGATT
AGCTTCCGGG GTCAAGATAT AACTAAGACC AAGACCGCAG ATATCGTGAA AAAGGGGATT
ACTCTGGTAC CCGAGGGCCG TCGTATTTTT GCCAATCTTA CAGTATTGGA AAATATACAG
ATGGGGGCCT TCTCCCGAAA TGATAAGGAC GGAATTAAGC AGGATATAAA AAACATATAT
GAGATGTTTC CTCGATTAAA GGAGAGGGAA TGGCAAGCTG CTGGGACCCT TTCTGGTGGT
GAACAGCAAA TGTTAGCCAT TGGCAGGGCA TTAATGTCTC GTCCGGTTCT CTTAATGATG
GATGAACCTT CTTTGGGATT GGCACCCCTT TTGGTAAAAG AAGTCTTCCG AATTATTAAA
GACATCTATG GTAAGGGGAT GACCATATTG TTGATTGAGC AGAATGCTAC GGCGGCACTG
CAAGCAGCCG ATTATGGTTA TGTGTTGGAA ACCGGCAATA TCGTCCTTCA GGGTCCAGGA
AAAGAATTGG CTGCCAATGA TGAAATTAAA AAAGCCTATT TAGGAAAGGC TTAA
 
Protein sequence
MKLLKIEDLH VYYGGIHALK GITLEVPENK IVTLVGANGA GKSTTLRAIS SLVPIAQGKI 
SFRGQDITKT KTADIVKKGI TLVPEGRRIF ANLTVLENIQ MGAFSRNDKD GIKQDIKNIY
EMFPRLKERE WQAAGTLSGG EQQMLAIGRA LMSRPVLLMM DEPSLGLAPL LVKEVFRIIK
DIYGKGMTIL LIEQNATAAL QAADYGYVLE TGNIVLQGPG KELAANDEIK KAYLGKA