| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2930 |
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| Symbol | |
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| ID | 4955623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 3173781 |
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| End bp | 3174608 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640182115 |
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| Product | spermidine synthase |
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| Protein accession | YP_001114258 |
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| Protein GI | 134300762 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGACT TCTGGTTCAC CGAACATCAC ACCGATAACT ATAAGGTATC CTGGCGGATG
GATAAAATTC TACATTTCGA AAAATCTCCC TTTCAAGAAA TTGCAGTTGT GGAATCTCCG
GAATTGGGAC GTGCCTTATT GTTGGATAAC ATTGTCCAAA CCACCACCAA GTTCGAGTTT
ATTTACCACG AGACCATTGT ACACATACCG TTAATGATCC ACCCTGAACC CAAAAGGGTT
ATGGTGGTGG GAGGCGGAGA CGGTGGCGCA GTTAAAGAAA TTTTAAAACA CCCCTCTGTT
GAAACCGTTG ATTTAATTGA AATTGATGAA CGGGTAATTG AAGTAAGTAA AAAATGGCTG
CCGGAGATAA GCCACGCCTT ACGCTCTGAT AAAGTTAACA TTATGACCAT TGATGGCCTT
AAACACATGA AACAATGTTC TTCCCAGTAT GACATTATTA TTGTGGACTG TACGGACCCC
AGTGGCCCTT CCATGGATTT GTTTTCTAAG GACTTCTACA GGGATGTTTA CAATGCCCTT
AAGGACGATG GTGTATTTGT TTCCCAAACC GGTTCACCTT CCTTTAGTAC TCATTTTAAA
CAGGCCGTGC AAAACATTAT GGAAGTGTTT CCACTGGCAA AACCTTATCT GACCTGCGAA
CCCACCTATA TTGCCGGGTT TTGGAGTTTC ACGGTTGGTT CTAAAAAATA TCAATTGGAC
AATATTAATC CAGAACGGAT GTTTAATATA GAGACAAAAT ATTACACCCC TGACATTCAC
AAAGCAGCCT TTGTTTTACC TAAATACATT GAACAACTCC TCAAATAA
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| Protein sequence | MLDFWFTEHH TDNYKVSWRM DKILHFEKSP FQEIAVVESP ELGRALLLDN IVQTTTKFEF
IYHETIVHIP LMIHPEPKRV MVVGGGDGGA VKEILKHPSV ETVDLIEIDE RVIEVSKKWL
PEISHALRSD KVNIMTIDGL KHMKQCSSQY DIIIVDCTDP SGPSMDLFSK DFYRDVYNAL
KDDGVFVSQT GSPSFSTHFK QAVQNIMEVF PLAKPYLTCE PTYIAGFWSF TVGSKKYQLD
NINPERMFNI ETKYYTPDIH KAAFVLPKYI EQLLK
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