| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2928 |
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| Symbol | |
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| ID | 4956007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3171134 |
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| End bp | 3172429 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640182113 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001114256 |
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| Protein GI | 134300760 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00603978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGGAAG TGGAAAATGC TGGGGAAGCA AGTAAGTTTC AAAAAATTAA AGCACGGTTT
AAGGGTTGGC CGCGTTGGCT GAAATGGTTG CTAGGAATTA TTTTCCTTTT AGGTCTGGGC
CTGTTATTTT TCTATAATCG TAGCAACAAC GATGACATGG TTGTACAAAC CACTAAGGTA
GAGATGAAAA GCATTGAACA AAGTGTAATG TCAACGGGTA AACTGGAGTC GGCAGAAAAA
CAAGAATTTT TTACACCAGT GGACAGTACA TTAATGGAAA TATCTGTTAA AGTTGGTGAT
AGGCTAAAAA AGGGGCAGGT TTTGGGACGG CTGGATACTC AGGAGTTAGG ACGCCTTTAC
CAACAGGCAG TGGCGAAACT GGCTGGTTTA GAAGCCCAAC TGGCTCGGGC TAAGGCCACC
GATGATCAAT TAACCCTGGA ATATAATACG GCTTCTTATG AGAAAGCCAA GAATCAGCTA
GATCGCATGA CGGAGCTGCA TCGGGGCGGT GCAGTGGCAA AAACCGAATT GGAACAGGCG
AAGGTGGATT TTGCTAAGGC CGAAGCTGAT TATAAAGAAG CCTTAATGAA GGTCCAACAA
GGGGCATCTG CCAAGGAGAT TGCTTCTCTG CAATCACAGG TAGACTTATG CAAGCAGGAA
GTTTCCCAGG CTAAGGAACG TTTGGACTTG GCAACCTTTA TTTGTAAAGA AGACGGAGTT
GTTCTCTTTG TGGGGGCCGA GAAGGGAACC CGTGTTTTAG AAGGTACTCG CCTGCTGGCG
GTTGGCAGTG ACAGTAAACT GGAGGTTATT GCCAATGTGA ATGAAATTGA TGCCGGAACC
CTGAAGGTGG GACAACCGGT TGCCATTTCC TGCACTTCCC TGCCGGGTAA GAAATTTAGC
GGTGAGGTAA CCCGTGTGGC CGGTGTGGCT GTAAAGGAGG ACAGTACCAG TGGTAACAGC
AATACCATTG TACCGGTAAC CATTCAAGTA GAGGGGGATA CCCTCGGCCT AAAGCCAGGT
TATACCGTGG ATGTTAGCAT TATTACATTG GAGGCGAAAA AACTCTTAAC TGTACCCTTT
GAGGCCATTA TCACGCAAAA TGGTGAAAAG CTGGTCTATG TGGTGCAAGG AGGTATTGCC
AAAAAGCGGA AAATTAAAAC CGAGAAGGGA AATGAGTTGT ACGATATAGT TATCAGCGGC
TTAAAAGAAG GGGAAAAGAT TATTTTAAAT CCATCACCGG CCTTACAGGA TGGTCAAAGG
GTTGCAACAG GAGAGGCAAA TGATAAAGGT AAGTAA
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| Protein sequence | MLEVENAGEA SKFQKIKARF KGWPRWLKWL LGIIFLLGLG LLFFYNRSNN DDMVVQTTKV
EMKSIEQSVM STGKLESAEK QEFFTPVDST LMEISVKVGD RLKKGQVLGR LDTQELGRLY
QQAVAKLAGL EAQLARAKAT DDQLTLEYNT ASYEKAKNQL DRMTELHRGG AVAKTELEQA
KVDFAKAEAD YKEALMKVQQ GASAKEIASL QSQVDLCKQE VSQAKERLDL ATFICKEDGV
VLFVGAEKGT RVLEGTRLLA VGSDSKLEVI ANVNEIDAGT LKVGQPVAIS CTSLPGKKFS
GEVTRVAGVA VKEDSTSGNS NTIVPVTIQV EGDTLGLKPG YTVDVSIITL EAKKLLTVPF
EAIITQNGEK LVYVVQGGIA KKRKIKTEKG NELYDIVISG LKEGEKIILN PSPALQDGQR
VATGEANDKG K
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