Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2927 |
Symbol | |
ID | 4955478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 3170437 |
End bp | 3171150 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640182112 |
Product | ABC transporter related |
Protein accession | YP_001114255 |
Protein GI | 134300759 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0132114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGG TAAGTAATTT AAAAAAAGTT TATCAAACAG GGGCTGTTTC TGTGGAAGCA CTGAAGGGCG TGTCACTGAC CATTCATAAA GGTGAGTTTG TGGCAGTAAT GGGGCCATCG GGTTCAGGAA AATCCACCTT TATGAATCTG CTAGGTTTGT TGGATACTCC CACCGAGGGG ACCTACTGGT TGGCAGATCG TGAGGTTTCA TCCTTAAACA AAAATGAATT AGCCATGATT CGTAACCAAA GGTTAGGCTT TGTATTTCAA ACTTTTAATT TAATTCCAGC CCTTAACGCT TTAAAAAATG TAGAATTACC GATGCTCTAT GCCGGTGTTA AAGCCGCTGA ACGACGGCAG AGGGCACAAC AAGCCTTGGA AAGAGTTGGA TTGGGGGGAC GAGTACAGCA CCGCCCCAAT GAACTATCCG GGGGACAGAA CCAAAGGGTA GCCATCGCCA GGGCCTTGGT AAACTCTCCG TCAGTCATTA TGGCCGATGA GCCCACTGGT GCCCTGGATA CACGGACCGG GGAAGAAATT ATGGCTATCT TCCAGGAACT TCACAGGGAG GGGACAACCA TCGTACTGGT GACCCACGAA CCAGATATAG CAATGCACGC GGAGCGGATT TTACATTTTA AAGATGGCCT TTTAATCAGT GATGAAAAGG TAGCTAACCG GATTATTTCC TCTGTAGAAG AGGTGAGCCA GTGA
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Protein sequence | MIKVSNLKKV YQTGAVSVEA LKGVSLTIHK GEFVAVMGPS GSGKSTFMNL LGLLDTPTEG TYWLADREVS SLNKNELAMI RNQRLGFVFQ TFNLIPALNA LKNVELPMLY AGVKAAERRQ RAQQALERVG LGGRVQHRPN ELSGGQNQRV AIARALVNSP SVIMADEPTG ALDTRTGEEI MAIFQELHRE GTTIVLVTHE PDIAMHAERI LHFKDGLLIS DEKVANRIIS SVEEVSQ
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