Gene Dred_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2927 
Symbol 
ID4955478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3170437 
End bp3171150 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content46% 
IMG OID640182112 
ProductABC transporter related 
Protein accessionYP_001114255 
Protein GI134300759 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0132114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGG TAAGTAATTT AAAAAAAGTT TATCAAACAG GGGCTGTTTC TGTGGAAGCA 
CTGAAGGGCG TGTCACTGAC CATTCATAAA GGTGAGTTTG TGGCAGTAAT GGGGCCATCG
GGTTCAGGAA AATCCACCTT TATGAATCTG CTAGGTTTGT TGGATACTCC CACCGAGGGG
ACCTACTGGT TGGCAGATCG TGAGGTTTCA TCCTTAAACA AAAATGAATT AGCCATGATT
CGTAACCAAA GGTTAGGCTT TGTATTTCAA ACTTTTAATT TAATTCCAGC CCTTAACGCT
TTAAAAAATG TAGAATTACC GATGCTCTAT GCCGGTGTTA AAGCCGCTGA ACGACGGCAG
AGGGCACAAC AAGCCTTGGA AAGAGTTGGA TTGGGGGGAC GAGTACAGCA CCGCCCCAAT
GAACTATCCG GGGGACAGAA CCAAAGGGTA GCCATCGCCA GGGCCTTGGT AAACTCTCCG
TCAGTCATTA TGGCCGATGA GCCCACTGGT GCCCTGGATA CACGGACCGG GGAAGAAATT
ATGGCTATCT TCCAGGAACT TCACAGGGAG GGGACAACCA TCGTACTGGT GACCCACGAA
CCAGATATAG CAATGCACGC GGAGCGGATT TTACATTTTA AAGATGGCCT TTTAATCAGT
GATGAAAAGG TAGCTAACCG GATTATTTCC TCTGTAGAAG AGGTGAGCCA GTGA
 
Protein sequence
MIKVSNLKKV YQTGAVSVEA LKGVSLTIHK GEFVAVMGPS GSGKSTFMNL LGLLDTPTEG 
TYWLADREVS SLNKNELAMI RNQRLGFVFQ TFNLIPALNA LKNVELPMLY AGVKAAERRQ
RAQQALERVG LGGRVQHRPN ELSGGQNQRV AIARALVNSP SVIMADEPTG ALDTRTGEEI
MAIFQELHRE GTTIVLVTHE PDIAMHAERI LHFKDGLLIS DEKVANRIIS SVEEVSQ