Gene Dred_2913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2913 
Symbol 
ID4958371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3156175 
End bp3157122 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content43% 
IMG OID640182094 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_001114242 
Protein GI134300746 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000125004 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATTCC CTACCCTAAC AATTGGTAAA TTTACTCCAA AATACCCCAT CATCCAGGGA 
GGTATGGCAG TTCGGGTTTC AACGGCGCCA CTGGCAGGTG CAGTAGCTGC AGCTGGTGGG
ATTGGTGTTA TTGGTGCCAC TGGCATGGAA GAACAGGAAC TTCGTGATGA GATCCGTGAG
GCTCGTAGAA TTGCCCCGAA TGGTATCATT GGTATTAATA TAATGTATGC AGCCAAAGAA
TTCTCTAAAA TTGTGCACAC GGCCATGGAG GAAAAGATAG ATATGATCTT TACCGGTGCA
GGTTTCTCCA GGGATATCTT TGGCTGGGGA AAAGAATCCA ATACACCAAT TGTATCCATT
GTTTCTTCAG CAAAGGTTGC AAAATTGGCT GAGAAACTAG GTGCCGCAGC GGTGGTGGCT
GAGGGTACTG AAGCCGGGGG GCACCTGGGT ACTGATCGTT CTATTAAAGA TATTTTACCG
GAAATAAGAA AGGCTGTAAA AATCCCTGTG ATTGCAGCCG GTGGTATCAT AGACGGCAAA
GGAATTGCAG AAGTTATTCG TATGGGTGCT GATGGAGTTC AAATGGCAAC CCGCTTTGTC
CTCAGTGTAG AATGTGCCGT GTCCGATGCC TTTAAGAAAC ACTATTTAAA TTCCTCTGCC
GAAGATGTGG TTGAAATTTT GAGCCCAGTT GGCTTACCTG GTAGGGCTTT AAAAAATAAT
CTTGTTTCCC GTATTTTTAG TAATGATGCT CCAAAACCTA AAAAATGCGT TTCCTGTTTA
AAACATTGTT CTAAGTCCTT CTGCATTATG AAAGCCCTTA CCAACAGTCG TGACGGTAAT
ATCGACGAAG GTCTTGTGTT CTGCGGTCAA AATGTTCATA AGATAAAAGA TATTTTACCA
GTTAAGGCCA TTTTTGATCG ATTAATTACA GAATTCCAAC AAGCCTAG
 
Protein sequence
MKFPTLTIGK FTPKYPIIQG GMAVRVSTAP LAGAVAAAGG IGVIGATGME EQELRDEIRE 
ARRIAPNGII GINIMYAAKE FSKIVHTAME EKIDMIFTGA GFSRDIFGWG KESNTPIVSI
VSSAKVAKLA EKLGAAAVVA EGTEAGGHLG TDRSIKDILP EIRKAVKIPV IAAGGIIDGK
GIAEVIRMGA DGVQMATRFV LSVECAVSDA FKKHYLNSSA EDVVEILSPV GLPGRALKNN
LVSRIFSNDA PKPKKCVSCL KHCSKSFCIM KALTNSRDGN IDEGLVFCGQ NVHKIKDILP
VKAIFDRLIT EFQQA