Gene Dred_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2905 
Symbol 
ID4956167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3148938 
End bp3149960 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content44% 
IMG OID640182086 
ProductGntR family transcriptional regulator 
Protein accessionYP_001114234 
Protein GI134300738 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGGAAG ATCATCTCCT TTGCTGGTGG TCTGCCAGCA CCACAGAAGG ATTTTTACCT 
CTTAGGGAAT ACATTGCTTC ACAAATGCAG GCCAAAGAGA TAGAGACCAA ATCGGACAAT 
ATCTTAATAA CAAATGGTTC CCAACAGGCA TTGGATCTAT TGGCCAAGTT GTTTATCAAT 
CCCGGGGATG TGGTGTTGGT TGAAAAGCCC AGTTATCTAG GGGCACTTCA AGTATTTAGA 
AGCTACCAAG CACGTTTTAT TGATGTTCCT ACGGATGATG AGGGAATTAA TATAGAGGCA 
CTGGATATTG CGATTAAAAA GCATCACCCA AAGCTTATAT ACGTAACCCC TACCTTTAAA 
AATCCCACGG GTGTAACGTT GAGCAAAGAA AGATGTCGTT CTGTGGCTAA AATTGTGCAG 
GAAAATAAGG TTCCTTTAAT TGAAGATGAC CCTTATGGGG AACTGCGTTA TTATGGAGAA 
GTGGTTCCTC CTATAAAATC CTTTGACGAA ACTGGCTGGG TAATCTATTT GAGTACTTTC 
TCTAAAACCA TTGCCCCGGG TCTGAGACTT GGTTGGCTTG TGGCGGAAAA AGATTTGATG 
GGGAAACTTG TCCTGGCAAA ACAAGGAACA GATTTGCACA CGGGGACTTT AGTGCAAAGA 
GCTGCTTATC ATTACCTGAT GAATTACAAT GTAACAAACC ATGTGGAGAC AATTCGTTCG 
GAGTACGGAC GGAGACGGGA CATAATGCTG CAGGAAATGG AGAAGAATTT CCCAACCAAT 
GTTTCCTGGA CGAAGCCAGA GGGGGGAATG TTCTTGTGGG TGACCTTACC GGAAAATTTA 
GATGCAGTAA AACTTCTGTC CAGGGCCATT GAGGAGAAGG TGGCCTATGT GCCCGGTGCT 
CCCTTCTACG CAGATGATGC ATGTCTTAAT ACACTGCGTT TAAATTATTC AAACGCTACG 
CCTGATCAAA TAAAGAGCGG GATTGGGAGG TTGGCAAACT TGTTTGGTAA ATTGCATGGG 
TAG
 
Protein sequence
MLEDHLLCWW SASTTEGFLP LREYIASQMQ AKEIETKSDN ILITNGSQQA LDLLAKLFIN 
PGDVVLVEKP SYLGALQVFR SYQARFIDVP TDDEGINIEA LDIAIKKHHP KLIYVTPTFK 
NPTGVTLSKE RCRSVAKIVQ ENKVPLIEDD PYGELRYYGE VVPPIKSFDE TGWVIYLSTF 
SKTIAPGLRL GWLVAEKDLM GKLVLAKQGT DLHTGTLVQR AAYHYLMNYN VTNHVETIRS 
EYGRRRDIML QEMEKNFPTN VSWTKPEGGM FLWVTLPENL DAVKLLSRAI EEKVAYVPGA 
PFYADDACLN TLRLNYSNAT PDQIKSGIGR LANLFGKLHG