Gene Dred_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2888 
Symbol 
ID4956598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3134893 
End bp3135378 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content48% 
IMG OID640182069 
Producthypothetical protein 
Protein accessionYP_001114217 
Protein GI134300721 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000829466 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTAT CGGAAATCAA AACCGGTTCC CCGGAGGAAA CAAAGTACCT AGGAGAACAG 
TTGGCAACCT TGTTAAAGCC CGGGGATGTT ATATGCCTTA ATGGAGATCT GGGGGCTGGG
AAAACGGCCT TTTCCCAGGG TGTGGCCAGA GGGTTAGGCG TAACCGGTGC AGTAACCAGT
CCGACCTTTA CCTTAATTAA CGAATATGAG GGCAGGCTGC CCCTTTACCA CTTTGATGTT
TATCGCCTGG ACGGTCCTGA GGATATGGAG GATCTGGGTT ATGAAGAATA TTTTTATGGA
CATGGTGTAT GCCTGATTGA ATGGGCCCAA CGGGTTAGGG ACGTTCTACC CCAGGAGCGA
TTGGACATAA ATTTAATCAG GGAAGCCAAT GCGGAGTCAG TCCGTATTGT CTATTTTGAG
CCTGCGGGCA ATCGTTATCA ACAGCTAGTA GAGGAGTTGA TCAAACTTGT ACATTCTGGG
AATTGA
 
Protein sequence
MILSEIKTGS PEETKYLGEQ LATLLKPGDV ICLNGDLGAG KTAFSQGVAR GLGVTGAVTS 
PTFTLINEYE GRLPLYHFDV YRLDGPEDME DLGYEEYFYG HGVCLIEWAQ RVRDVLPQER
LDINLIREAN AESVRIVYFE PAGNRYQQLV EELIKLVHSG N