Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2873 |
Symbol | groEL |
ID | 4956054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 3119860 |
End bp | 3121488 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640182054 |
Product | chaperonin GroEL |
Protein accession | YP_001114202 |
Protein GI | 134300706 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00235901 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAAAG AAATTATTTT CCGTGAAGAT GCTCGCAGAG CTCTGGAAAG AGGCGTTAAT GCCCTGGCCG AAGCTGTTAA GGTAACCCTT GGACCCAAGG GACGTAATGT AGTTATTGAG AAGAAGTTTG GTGCTCCAAC CATTACCAAC GATGGTGTAA CCATCGCCCG TGAAATTGAG CTTGAAGATA ACTTCGAAAA TATGGGTGCC CAATTGGTTA AAGAAGTGGC CACCAAAACC AACGATGTTG CTGGTGACGG TACCACCACT GCCACTGTTT TAGCCCAAGC TTTGGTACGT GAAGGTCTGA AAAACGTAGC TGCTGGTGCC AACCCTATGA TTATCAAACG TGGTATTGAA AAGGCTGTAG AAAAGGCTGT TGAAGAAATT AAAGCAATGG CTAAGCCTAT TGAGAGTAAA GAAGCGATTG CTCAGGTTGC TACCGTTTCT GCTAACGACG ATTCTATTGG TAACCTGATT GCCGAAGCTA TGGAAAAAGT AGGTAAAGAC GGTGTCATCA CCGTTGAAGA GTCCCAAGGT ATTGGCACCA ATTTAGAAGT GGTTGAAGGT ATGAACTTCG ACCGTGGCTA CATCTCCCCG TACATGATCA CTGATACTGA TAAGATGGAA GCTGCATTGA CTGATCCTTA CATCTTAATC ACCGATAAAA AGGTTTCCTC GGTACAAGAA CTTCTGCCTG TTTTGGAAAA GGTTGTACAA ACAGGTAACA AGCCTGTACT GTTGATTTGT GAAGATCTGG AAGGTGAAGC GCTGGCTACT CTGGTACTGA ACAAACTTCG TGGTACCTTG AATGTAGTTG CCGTTAAGGC TCCTGGTTTT GGGGACCGCC GTAAGGCCAT GCTGGAAGAT ATTGCTATTC TTACCGGTGG TACCGTAATT ACTGAAGAAG TAGGTCTGAA GCTGGATAAA GCTGAGCTAG ACATGTTGGG TACTGCCCGT CAGATTCGCG TTAAGAAAGA AGAAACCATC ATTGTTGGTG GTGCTGGAGA GCAAGCCCAA ATTGAAGGAC GTATTGCTCA AATCAAGAAG CAAATTGAAG AAACCACTTC TGACTTTGAC CGTGAAAAAC TGCAAGAACG CCTGGCTAAA CTGGCTGGCG GTGTAGCTGT AATTCAAGTT GGTGCTGCCA CCGAAGTTGA AATGAAAGAG AAAAAGCTGC GCATTGACGA TGCTCTAAAC GCTACCCGTG CAGCTGTCGA AGAAGGTATT GTTCCCGGTG GTGGTTCCGC CTTTGTGAAC ATCATTACCA CCTTAGATAG CGTTCAGCTG GAAGGGGATG CTAAAACTGG CGTTGATATC GTTAAGCGCG CTCTGGAAGA GCCCCTGCGT CAAATTGCCA ACAACGCTGG ACTGGAAGGC TCTGTGGTGG TAGAAAAGGT TCGCACCACT GGCAAAGGTT TCAATGCCAT GTCTGAAGAA TATGTTGATA TGATTGCTGC TGGTATTATC GACCCTGCTA AAGTTACACG TTCCGCTTTA CAAAACGCTG CTTCCATTGC AGCTATGGTT CTGACCACCG AGACCTTAGT GGCCGACAAG CCAGAAAAAG ATGCTCCGAA CCCCATGGCC GGCATGGGCG GTATGGGTGG CATGGGCGGC ATGATGTAA
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Protein sequence | MAKEIIFRED ARRALERGVN ALAEAVKVTL GPKGRNVVIE KKFGAPTITN DGVTIAREIE LEDNFENMGA QLVKEVATKT NDVAGDGTTT ATVLAQALVR EGLKNVAAGA NPMIIKRGIE KAVEKAVEEI KAMAKPIESK EAIAQVATVS ANDDSIGNLI AEAMEKVGKD GVITVEESQG IGTNLEVVEG MNFDRGYISP YMITDTDKME AALTDPYILI TDKKVSSVQE LLPVLEKVVQ TGNKPVLLIC EDLEGEALAT LVLNKLRGTL NVVAVKAPGF GDRRKAMLED IAILTGGTVI TEEVGLKLDK AELDMLGTAR QIRVKKEETI IVGGAGEQAQ IEGRIAQIKK QIEETTSDFD REKLQERLAK LAGGVAVIQV GAATEVEMKE KKLRIDDALN ATRAAVEEGI VPGGGSAFVN IITTLDSVQL EGDAKTGVDI VKRALEEPLR QIANNAGLEG SVVVEKVRTT GKGFNAMSEE YVDMIAAGII DPAKVTRSAL QNAASIAAMV LTTETLVADK PEKDAPNPMA GMGGMGGMGG MM
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